RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 OR52K2Q8NGK3 314 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 LMLNQ96KR4 655 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 CD320Q9NPF0 282 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 HEBP1Q9NRV9 189 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 DNAJC17Q9NVM6 304 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 SAR1BQ9Y6B6 198 aa16.33■□□□□ 0.2
CSNK1D-212ENST00000580061 CEP104O60308 925 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 TJP3O95049 919 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 CISD3P0C7P0 127 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 HLA-FP30511 346 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 CD70P32970 193 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 SERPINB6P35237 376 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 OPRD1P41143 372 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 SLC6A11P48066 632 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 NDST2P52849 883 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 OXCT1P55809 520 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 DYNLT1P63172 113 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 LMAN2Q12907 356 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 IER5LQ5T953 404 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 AFMIDQ63HM1 303 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 ASTLQ6HA08 431 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 ZNF783Q6ZMS7 281 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 BBS12Q6ZW61 710 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 SLC13A5Q86YT5 568 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 RASGEF1CQ8N431 466 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 COG1Q8WTW3 980 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 NECAB3Q96P71 396 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 LRRC19Q9H756 370 aa16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 C8orf33Q9H7E9 229 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 KIAA1522Q9P206 1035 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-212ENST00000580061 SHROOM3Q8TF72 1996 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 VCANP13611 3396 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 ILVBLA1L0T0 632 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 SPECC1L-ADORA2AF8WAN1 911 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 TRIM24O15164 1050 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 ZNF185O15231 689 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 MFSD11O43934 449 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 RAMP2O60895 175 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 GLULP15104 373 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 TGM2P21980 687 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 CTHP32929 405 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 CSKP41240 450 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 DGKGP49619 791 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 YBEYP58557 167 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 GNA12Q03113 381 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 GBE1Q04446 702 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 SLC12A1Q13621 1099 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 NAIF1Q69YI7 327 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 KIAA0907Q7Z7F0 614 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 RALGPS2Q86X27 583 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 ARHGAP12Q8IWW6 846 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 PHTF2Q8N3S3 785 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 ALG14Q96F25 216 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 ABCB8Q9NUT2 735 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 DEC1Q9P2X7 70 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 SLC27A6Q9Y2P4 619 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 OR51B4Q9Y5P0 310 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 PIAS3Q9Y6X2 628 aa16.31■□□□□ 0.2
CSNK1D-212ENST00000580061 A0A0D9SEW6 157 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 TCRBV7S2A1N4TA0A589 114 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 MZF1P28698 734 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 PLK1P53350 603 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 SLC10A2Q12908 348 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 POLD3Q15054 466 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 GEN1Q17RS7 908 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 PARP15Q460N3 678 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 SLC44A4Q53GD3 710 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 RNF219Q5W0B1 726 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 GRAMD4Q6IC98 578 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 NPNTQ6UXI9 565 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 TP53INP2Q8IXH6 220 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 UBALD2Q8IYN6 164 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 NETO2Q8NC67 525 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 ZNF592Q92610 1267 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 ARHGEF2Q92974 986 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 MS4A14Q96JA4 679 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 PNKPQ96T60 521 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 FEM1AQ9BSK4 669 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 DTLQ9NZJ0 730 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 MUTYHQ9UIF7 546 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 GGA2Q9UJY4 613 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 TTC7AQ9ULT0 858 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 HEY1Q9Y5J3 304 aa16.3■□□□□ 0.2
CSNK1D-212ENST00000580061 RASA4BC9J798 803 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 APOC4-APOC2K7ER74 178 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 RASA4O43374 803 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 MAP3K6O95382 1288 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 APOC2P02655 101 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 FGGP02679 453 aa16.29■□□□□ 0.2
CSNK1D-212ENST00000580061 PABPC1P11940 636 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms