RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 KLHDC10Q6PID8 442 aa11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 CFAP52Q8N1V2 620 aa11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 ATPAF2Q8N5M1 289 aa11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 USP33Q8TEY7 942 aa11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 ZFRQ96KR1 1074 aaKnown RBP11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 RPRD1AQ96P16 312 aaPredicted RBP11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 AGAP3Q96P47 875 aa11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 IRAK3Q9Y616 596 aa11.21□□□□□ -0.61
PDXDC1-216ENST00000569715 ZBTB24O43167 697 aaPredicted RBP11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 STK10O94804 968 aaKnown RBP11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 GJA1P17302 382 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 TACR2P21452 398 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 ZXDBP98169 803 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 PID1Q7Z2X4 250 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 TADA2BQ86TJ2 420 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 TMC8Q8IU68 726 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 FBXO36Q8NEA4 188 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 LRRC3Q9BY71 257 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 PIH1D1Q9NWS0 290 aaKnown RBP11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 PPARGC1AQ9UBK2 798 aaKnown RBP11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 LZTS1Q9Y250 596 aa11.21□□□□□ -0.62
PDXDC1-216ENST00000569715 TLDC2A0PJX2 215 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 GOLGA6CA6NDK9 693 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 WASH4PA8MWX3 477 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 CCL16O15467 120 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 ACSL4O60488 711 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 MAFKO60675 156 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 GOLGA6DP0CG33 693 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 RHOQP17081 205 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 GABRR2P28476 465 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 CORO1AP31146 461 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 PAPOLAP51003 745 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 SGSHP51688 502 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 EIF3BP55884 814 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 GPX6P59796 221 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 SHHQ15465 462 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 LRRC31Q6UY01 552 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 LGI2Q8N0V4 545 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 PDIK1LQ8N165 341 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 EXOC4Q96A65 974 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 ATP6V1G3Q96LB4 118 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 KLF16Q9BXK1 252 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 MTIF3Q9H2K0 278 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 TMEM248Q9NWD8 314 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 HCFC1R1Q9NWW0 138 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 GOLGA6AQ9NYA3 693 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 BCCIPQ9P287 314 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 MAFFQ9ULX9 164 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 E7EVH7 732 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 GLUD1P00367 558 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 JCHAINP01591 159 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 LRG1P02750 347 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 CLCN4P51793 760 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 DNAJC21Q5F1R6 531 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 STXBP5Q5T5C0 1151 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 ITIH5Q86UX2 942 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 CNTD1Q8N815 330 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 ARL14EPQ8N8R7 260 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 HMCESQ96FZ2 354 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 PRICKLE1Q96MT3 831 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 UXTQ9UBK9 157 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 CTNNAL1Q9UBT7 734 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 DRGXA6NNA5 263 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 RFPL2O75678 378 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 PIAS1O75925 651 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 MBL2P11226 248 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 SSTR1P30872 391 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 ELK3P41970 407 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 MAGEA10P43363 369 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 PPARDQ03181 441 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 SPARCL1Q14515 664 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 MICAL1Q8TDZ2 1067 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 TRIM56Q9BRZ2 755 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 EMILIN2Q9BXX0 1053 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 BRD8Q9H0E9 1235 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 VPS37BQ9H9H4 285 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
PDXDC1-216ENST00000569715 GOLGA6L10A6NI86 522 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 SMAPO00193 183 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 NFKB1P19838 968 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 TPSB2P20231 275 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 HARS2P49590 506 aaKnown RBP11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 TPSAB1Q15661 275 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 C4orf22Q6V702 233 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 UMODL1-AS1Q8N2C9 162 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 MPP5Q8N3R9 675 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 LZTR1Q8N653 840 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 ADAMTS19Q8TE59 1207 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 PLD4Q96BZ4 506 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 FERMT1Q9BQL6 677 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 IGSF9Q9P2J2 1179 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 CHD5Q8TDI0 1954 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 F5H5T6 163 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 FDFT1P37268 417 aa11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 RPS24P62847 133 aaKnown RBP11.19□□□□□ -0.62
PDXDC1-216ENST00000569715 COG7P83436 770 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms