RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CENPCQ03188 943 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 FAM46CQ5VWP2 391 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 STRADAQ7RTN6 431 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 FRMD1Q8N878 549 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 PABPC3Q9H361 631 aaKnown RBP17.23■□□□□ 0.35
USB1-211ENST00000565662 KDM4CQ9H3R0 1056 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 NLRC4Q9NPP4 1024 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 PIGVQ9NUD9 493 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 DNAAF2Q9NVR5 837 aaKnown RBP17.23■□□□□ 0.35
USB1-211ENST00000565662 ADAMTS1Q9UHI8 967 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 XPO7Q9UIA9 1087 aaKnown RBP17.23■□□□□ 0.35
USB1-211ENST00000565662 INTS6Q9UL03 887 aaKnown RBP17.23■□□□□ 0.35
USB1-211ENST00000565662 VANGL2Q9ULK5 521 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 HS3ST4Q9Y661 456 aa17.23■□□□□ 0.35
USB1-211ENST00000565662 CACNA1EQ15878 2313 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 ATXN2Q99700 1313 aaKnown RBP17.22■□□□□ 0.35
USB1-211ENST00000565662 C1QTNF3-AMACRE9PGA6 284 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 SLC7A4O43246 635 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 KCNK5O95279 499 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 ZNF883P0CG24 379 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 C5AR1P21730 350 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 PTPN9P43378 593 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 AFF3P51826 1226 aaKnown RBP17.22■□□□□ 0.35
USB1-211ENST00000565662 RNASE9P60153 205 aaKnown RBP17.22■□□□□ 0.35
USB1-211ENST00000565662 PITX1P78337 314 aaPredicted RBP17.22■□□□□ 0.35
USB1-211ENST00000565662 FMO1Q01740 532 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 NRG1Q02297 640 aaPredicted RBP17.22■□□□□ 0.35
USB1-211ENST00000565662 DCAF12L1Q5VU92 463 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 AOPEPQ8N6M6 819 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 DCAF4L2Q8NA75 395 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 OR8D1Q8WZ84 308 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 IQCDQ96DY2 449 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 MYO19Q96H55 970 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 MRGPRX3Q96LB0 322 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 SLC6A17Q9H1V8 727 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 RXFP3Q9NSD7 469 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 TMEM74BQ9NUR3 256 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 DONSONQ9NYP3 566 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 TMEM59LQ9UK28 342 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 VPS28Q9UK41 221 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 PCDH15Q96QU1 1955 aa17.22■□□□□ 0.35
USB1-211ENST00000565662 IGLV3-10A0A075B6K4 115 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 PATE3B3GLJ2 98 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 CDX4O14627 284 aaPredicted RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 BCAT2O15382 392 aaPredicted RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 DFNA5O60443 496 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 SIN3BO75182 1162 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 ENDOD1O94919 500 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 RHOCP08134 193 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 PDGFRAP16234 1089 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 NOVA1P51513 510 aaKnown RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 AIF1P55008 147 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 GEMIN4P57678 1058 aaKnown RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 CST6Q15828 149 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 FSCBQ5H9T9 825 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 CXorf57Q6NSI4 855 aaKnown RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 BNIPLQ7Z465 357 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 PHF13Q86YI8 300 aaPredicted RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 C3orf20Q8ND61 904 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 CPA5Q8WXQ8 436 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 TBCBQ99426 244 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 OMDQ99983 421 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 MUC3BQ9H195 1237 aa17.21■□□□□ 0.35
USB1-211ENST00000565662 PPARGC1AQ9UBK2 798 aaKnown RBP17.21■□□□□ 0.35
USB1-211ENST00000565662 A0A1W2PQC6 194 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 DRGXA6NNA5 263 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 GOLGA8SH3BPF8 625 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 ATP9BO43861 1147 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 GRIA4P48058 902 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 SLC20A2Q08357 652 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 NCAPHQ15003 741 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 ANO6Q4KMQ2 910 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 MINDY1Q8N5J2 469 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 OR2T34Q8NGX1 318 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 GANCQ8TET4 914 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 VCPIP1Q96JH7 1222 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 FEM1AQ9BSK4 669 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 SELENOOQ9BVL4 669 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 GTPBP2Q9BX10 602 aaKnown RBP17.2■□□□□ 0.34
USB1-211ENST00000565662 EDEM3Q9BZQ6 932 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 ZYG11BQ9C0D3 744 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 SIK2Q9H0K1 926 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 METTL5Q9NRN9 209 aaKnown RBP17.2■□□□□ 0.34
USB1-211ENST00000565662 FBXL12Q9NXK8 326 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 ADAM22Q9P0K1 906 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 ANGPTL2Q9UKU9 493 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 HS3ST2Q9Y278 367 aa17.2■□□□□ 0.34
USB1-211ENST00000565662 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.2■□□□□ 0.34
USB1-211ENST00000565662 ILVBLA1L0T0 632 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 TRIM16O95361 564 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 KRT3P12035 628 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 UNGP13051 313 aaPredicted RBP17.19■□□□□ 0.34
USB1-211ENST00000565662 CD27P26842 260 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 FLT3P36888 993 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 MAPK8P45983 427 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 ZNF165P49910 485 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 SHC2P98077 582 aa17.19■□□□□ 0.34
USB1-211ENST00000565662 CLEC16AQ2KHT3 1053 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms