RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 TMEM92Q6UXU6 159 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 TMPRSS6Q8IU80 811 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 KIAA2013Q8IYS2 634 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 CCAR2Q8N163 923 aaKnown RBP8.92□□□□□ -0.98
USP3-208ENST00000558285 OLIG1Q8TAK6 271 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 GANCQ8TET4 914 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 NT5C3BQ969T7 300 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 TTC17Q96AE7 1141 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 ZYG11BQ9C0D3 744 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 SIK2Q9H0K1 926 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 METTL5Q9NRN9 209 aaKnown RBP8.92□□□□□ -0.98
USP3-208ENST00000558285 SEMA4GQ9NTN9 838 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 ARHGEF38Q9NXL2 777 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 AIPL1Q9NZN9 384 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 VPS28Q9UK41 221 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 VANGL2Q9ULK5 521 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 COL4A3Q01955 1670 aa8.92□□□□□ -0.98
USP3-208ENST00000558285 CXorf51AA0A1B0GTR3 108 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 GOLGA6L7A0A1B0GV03 622 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 LRRC53A6NM62 1247 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SIGLEC16A6NMB1 481 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 MEI4A8MW99 385 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 KIF1CO43896 1103 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 RHOCP08134 193 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SYPP08247 313 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ZNF806P0C7X5 589 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 UNGP13051 313 aaPredicted RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 SLC6A4P31645 630 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 CSKP41240 450 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ID4P47928 161 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 PLK1P53350 603 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ZBED6P86452 979 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SPEM2Q0P670 501 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 CAMK2GQ13555 558 aaPredicted RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 NR1I3Q14994 352 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 IQCB1Q15051 598 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 TAF5Q15542 800 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 PLEKHG6Q3KR16 790 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 DAB2IPQ5VWQ8 1189 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 RNF43Q68DV7 783 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 NADSYN1Q6IA69 706 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 PRR23CQ6ZRP0 262 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ERMP1Q7Z2K6 904 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 KIAA0907Q7Z7F0 614 aaPredicted RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 LUZP1Q86V48 1076 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SYT12Q8IV01 421 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 CADM4Q8NFZ8 388 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SLC20A1Q8WUM9 679 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 MRGPRX1Q96LB2 322 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 EPAS1Q99814 870 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 RTKNQ9BST9 563 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 FUCA2Q9BTY2 467 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 DUSP15Q9H1R2 295 aaPredicted RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 ARRDC1-AS1Q9H2J1 176 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 TMEM59LQ9UK28 342 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 A0A1W2PQF6 199 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 BCLAF3A2AJT9 711 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 C1QTNF3-AMACRE9PGA6 284 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 RTN2O75298 545 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ADH1BP00325 375 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SERPING1P05155 500 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 NDUFV2P19404 249 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 OR1E1P30953 314 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 PRKCIP41743 596 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 IL12RB1P42701 662 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 MAPKAPK2P49137 400 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ZNF143P52747 638 aaPredicted RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 HNRNPH2P55795 449 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 ATP11AP98196 1134 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ELAVL3Q14576 367 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 HNRNPA1L2Q32P51 320 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 FUT11Q495W5 492 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 FBXL22Q6P050 247 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 USP30Q70CQ3 517 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 APTXQ7Z2E3 356 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 ADIPOR2Q86V24 386 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 RGL4Q8IZJ4 473 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 CFAP52Q8N1V2 620 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 MNS1Q8NEH6 495 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 RXFP2Q8WXD0 754 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 OR8D1Q8WZ84 308 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 NTAN1Q96AB6 310 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 PRICKLE1Q96MT3 831 aaPredicted RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 TBCBQ99426 244 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 CNPY3Q9BT09 278 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP3-208ENST00000558285 REPIN1Q9BWE0 567 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 DEF6Q9H4E7 631 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 CATSPERBQ9H7T0 1116 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 SGK2Q9HBY8 427 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 DYRK4Q9NR20 520 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 KCND1Q9NSA2 647 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 PIGVQ9NUD9 493 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 PPARGC1AQ9UBK2 798 aaKnown RBP8.91□□□□□ -0.98
USP3-208ENST00000558285 CYP8B1Q9UNU6 501 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 ERVW-1Q9UQF0 538 aa8.91□□□□□ -0.98
USP3-208ENST00000558285 HS3ST4Q9Y661 456 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms