RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PMF1Q6P1K2 205 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-221ENST00000556571 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 ERICH1Q86X53 443 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 SPATS2Q86XZ4 545 aaKnown RBP12.29□□□□□ -0.44
ACTN1-221ENST00000556571 SPACA3Q8IXA5 215 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 FCRL2Q96LA5 508 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-221ENST00000556571 HSFY1Q96LI6 401 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 SERPINB11Q96P15 392 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 DMTF1Q9Y222 760 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 TLR6Q9Y2C9 796 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 SPTA1P02549 2419 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 NAV2Q8IVL1 2488 aa12.29□□□□□ -0.44
ACTN1-221ENST00000556571 COL6A6A6NMZ7 2263 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 ERVH48-1M5A8F1 160 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 SLC7A4O43246 635 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 FBXO21O94952 628 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 MT-CO3P00414 261 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 PAEPP09466 180 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 MZF1P28698 734 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-221ENST00000556571 PPP2CBP62714 309 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 PPP2CAP67775 309 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 SULT2A1Q06520 285 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 KCNH2Q12809 1159 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 ZNF211Q13398 564 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-221ENST00000556571 NNTQ13423 1086 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 STAT4Q14765 748 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 CNGA2Q16280 664 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 CBWD6Q4V339 395 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 HS1BP3Q53T59 392 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 CBWD3Q5JTY5 395 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 CBWD5Q5RIA9 395 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 TCERG1LQ5VWI1 586 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 CFAP52Q8N1V2 620 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 UBR7Q8N806 425 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 ZNF248Q8NDW4 579 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 DQX1Q8TE96 717 aaKnown RBP12.28□□□□□ -0.44
ACTN1-221ENST00000556571 FAM131CQ96AQ9 280 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 WBP1Q96G27 269 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 SLC39A13Q96H72 371 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 RPL10LQ96L21 214 aaKnown RBP12.28□□□□□ -0.44
ACTN1-221ENST00000556571 SPAG5Q96R06 1193 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 LGMNQ99538 433 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 NUCKS1Q9H1E3 243 aaKnown RBP12.28□□□□□ -0.44
ACTN1-221ENST00000556571 ARHGAP20Q9P2F6 1191 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 CYTH4Q9UIA0 394 aa12.28□□□□□ -0.44
ACTN1-221ENST00000556571 PLXNA2O75051 1894 aa12.27□□□□□ -0.44
ACTN1-221ENST00000556571 J3QKU1 62 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 PIK3R2O00459 728 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 SIGLEC6O43699 453 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 DRD3P35462 400 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 UCNP55089 124 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 NUCB2P80303 420 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 LRMPQ12912 555 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 SLC12A1Q13621 1099 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 STILQ15468 1287 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 TAF1BQ53T94 588 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-221ENST00000556571 DCAF17Q5H9S7 520 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-221ENST00000556571 FAM46CQ5VWP2 391 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 TMEM270Q6UE05 265 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 PCSK4Q6UW60 755 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 KDM7AQ6ZMT4 941 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 DSG4Q86SJ6 1040 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 APCDD1Q8J025 514 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 LGI2Q8N0V4 545 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 LSMEM2Q8N112 164 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 CLEC4CQ8WTT0 213 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 TFAP2BQ92481 460 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 ZNF578Q96N58 590 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-221ENST00000556571 TJP2Q9UDY2 1190 aa12.27□□□□□ -0.45
ACTN1-221ENST00000556571 FAM237AA0A1B0GTK4 181 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 PRAMEF26H0Y7S4 382 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 M0QYV0 167 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 TRIM38O00635 465 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 SLC16A3O15427 465 aaKnown RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 SART1O43290 800 aaKnown RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 PLRG1O43660 514 aaKnown RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 RNGTTO60942 597 aaKnown RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 SDC3O75056 442 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 RTN2O75298 545 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 MOCS2O96007 188 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 APOEP02649 317 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 FYNP06241 537 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 MAT2AP31153 395 aaKnown RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 STK19P49842 368 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 NDUFA8P51970 172 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 PCBP4P57723 403 aaKnown RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 DAB2P98082 770 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 RHDQ02161 417 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 SETMARQ53H47 684 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-221ENST00000556571 BROXQ5VW32 411 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 KRBA2Q6ZNG9 492 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 TRIM69Q86WT6 500 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 SLC25A45Q8N413 288 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 OR8D1Q8WZ84 308 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 KLHDC7BQ96G42 594 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 TRIM62Q9BVG3 475 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms