RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 HCAR3P49019 387 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 SIGLEC14Q08ET2 396 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-217ENST00000545738 HS1BP3Q53T59 392 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ANKRD20A8PQ5CZ79 823 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ZNF569Q5MCW4 686 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 SORCS1Q8WY21 1168 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 XPO6Q96QU8 1125 aaKnown RBP16.73■□□□□ 0.27
LIMS2-217ENST00000545738 PSMB7Q99436 277 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ZNF670Q9BS34 389 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 DEC1Q9P2X7 70 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 SLC27A6Q9Y2P4 619 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 MYO15AQ9UKN7 3530 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 CCDC66A2RUB6 948 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 TYW5A2RUC4 315 aaKnown RBP16.73■□□□□ 0.27
LIMS2-217ENST00000545738 KAT7O95251 611 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 GLULP15104 373 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 GLDCP23378 1020 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ACVRL1P37023 503 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 CCINQ13939 588 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 PDK2Q15119 407 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ZFYVE27Q5T4F4 411 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 EMC10Q5UCC4 262 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 NCBP2-AS2Q69YL0 99 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 SPOCD1Q6ZMY3 1216 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ARHGAP12Q8IWW6 846 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.73■□□□□ 0.27
LIMS2-217ENST00000545738 OR7D4Q8NG98 312 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 CELF6Q96J87 481 aaKnown RBP16.73■□□□□ 0.27
LIMS2-217ENST00000545738 PNKPQ96T60 521 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 EPHX3Q9H6B9 360 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 GGA2Q9UJY4 613 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 NDRG2Q9UN36 371 aaKnown RBP16.73■□□□□ 0.27
LIMS2-217ENST00000545738 VPS13AQ96RL7 3174 aa16.73■□□□□ 0.27
LIMS2-217ENST00000545738 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-217ENST00000545738 H3BRJ5 948 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 MAP3K6O95382 1288 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 PABPC1P11940 636 aaKnown RBP16.72■□□□□ 0.27
LIMS2-217ENST00000545738 ARL4AP40617 200 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 CTSOP43234 321 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-217ENST00000545738 PRKCQQ04759 706 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 ZNF177Q13360 481 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-217ENST00000545738 CWF19L1Q69YN2 538 aaKnown RBP16.72■□□□□ 0.27
LIMS2-217ENST00000545738 GRAMD4Q6IC98 578 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 TRIM67Q6ZTA4 783 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 PLD5Q8N7P1 536 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 EXD1Q8NHP7 514 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 RNF157Q96PX1 679 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 ALS2CR12Q96Q35 445 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 FEM1AQ9BSK4 669 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 LRRC19Q9H756 370 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 TBC1D17Q9HA65 648 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 DDX56Q9NY93 547 aaKnown RBP16.72■□□□□ 0.27
LIMS2-217ENST00000545738 RCOR3Q9P2K3 495 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-217ENST00000545738 ACTL7AQ9Y615 435 aa16.72■□□□□ 0.27
LIMS2-217ENST00000545738 hCG_1818297A0A087WSY0 165 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 A0A0A0MRY4 1105 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 FGF10O15520 208 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-217ENST00000545738 MFSD11O43934 449 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 ATP1A1P05023 1023 aaKnown RBP16.71■□□□□ 0.27
LIMS2-217ENST00000545738 HTR7P34969 479 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 SLC10A2Q12908 348 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-217ENST00000545738 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 PITRM1Q5JRX3 1037 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 FAM182AQ5T1J6 154 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 RNF219Q5W0B1 726 aaPredicted RBP16.71■□□□□ 0.27
LIMS2-217ENST00000545738 AFMIDQ63HM1 303 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 PKN3Q6P5Z2 889 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 ARHGAP36Q6ZRI8 547 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 Q6ZS52 159 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 LRRN4Q8WUT4 740 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 SLC2A11Q9BYW1 496 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 LTB4R2Q9NPC1 389 aa16.71■□□□□ 0.27
LIMS2-217ENST00000545738 KANSL1LA0AUZ9 987 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 MIF4GDA9UHW6 222 aaKnown RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SNAP91O60641 907 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 ZRANB2O95218 330 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 RHOCP08134 193 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 CHRNB1P11230 501 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 MAPKAPK2P49137 400 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 RWDD2BP57060 319 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 GBE1Q04446 702 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 GAS6Q14393 721 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SLC9A4Q6AI14 798 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 NPNTQ6UXI9 565 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF852Q6ZMS4 543 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SETD3Q86TU7 594 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 UMODL1-AS1Q8N2C9 162 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 HMCESQ96FZ2 354 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 HEMGNQ9BXL5 484 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SLC39A8Q9C0K1 460 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 CATSPERBQ9H7T0 1116 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 C11orf16Q9NQ32 467 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 POLR3BQ9NW08 1133 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 SAE1Q9UBE0 346 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-217ENST00000545738 TCRBV7S2A1N4TA0A589 114 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 DAPK3O43293 454 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 PI15O43692 258 aa16.7■□□□□ 0.26
LIMS2-217ENST00000545738 CXCR5P32302 372 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms