RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 AMPD1P23109 780 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CTNNA2P26232 953 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MZF1P28698 734 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TNFRSF4P43489 277 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 DNA2P51530 1060 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 SEC13P55735 322 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 SLC12A1Q13621 1099 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 DPYSQ14117 519 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 LRRC32Q14392 662 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ANKRD20A8PQ5CZ79 823 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 DGKKQ5KSL6 1271 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TMCO3Q6UWJ1 677 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 KATNAL2Q8IYT4 538 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RCOR2Q8IZ40 523 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PJA1Q8NG27 643 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 OR52K2Q8NGK3 314 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 WFIKKN2Q8TEU8 576 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TSC1Q92574 1164 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MAK16Q9BXY0 300 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 LMAN1LQ9HAT1 526 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RBM12Q9NTZ6 932 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 NDFIP2Q9NV92 336 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ZNF212Q9UDV6 495 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 VPS28Q9UK41 221 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 SIT1Q9Y3P8 196 aa14.87□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ATG2BQ96BY7 2078 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 A0A0A0MRY4 1105 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 A0A0D9SEW6 157 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 K7EQS6 105 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RAMP2O60895 175 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 POLR2EP19388 210 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 IL4RP24394 825 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RWDD2BP57060 319 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 GNA12Q03113 381 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CCINQ13939 588 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 DMC1Q14565 340 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 POLD3Q15054 466 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PLEKHG6Q3KR16 790 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 FUT11Q495W5 492 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 FBXO43Q4G163 708 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PITRM1Q5JRX3 1037 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MBLAC2Q68D91 279 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ZNF783Q6ZMS7 281 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ZNF354CQ86Y25 554 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 APCDD1Q8J025 514 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CCDC26Q8TAB7 109 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 UCMAQ8WVF2 138 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 EZH1Q92800 747 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PBXIP1Q96AQ6 731 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RBM41Q96IZ5 413 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 LMLNQ96KR4 655 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 FEM1AQ9BSK4 669 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 F5P12259 2224 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TECTAO75443 2155 aa14.86□□□□□ -0.03
TNFRSF1A-216ENST00000543995 NCOR1O75376 2440 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ILVBLA1L0T0 632 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 DCLK1O15075 740 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RNF40O75150 1001 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ATP5BP06576 529 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CHRNB1P11230 501 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MSNP26038 577 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ETFBP38117 255 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 EIF4HQ15056 248 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ZNF569Q5MCW4 686 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TMEM215Q68D42 235 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CWF19L1Q69YN2 538 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 IL31Q6EBC2 164 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 KIAA0907Q7Z7F0 614 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ADIPOR2Q86V24 386 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RFX6Q8HWS3 928 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CCDC105Q8IYK2 499 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 EXD1Q8NHP7 514 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PCDH19Q8TAB3 1148 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 HES6Q96HZ4 224 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 SPON2Q9BUD6 331 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 OSBPL6Q9BZF3 934 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 ELOVL2Q9NXB9 296 aa14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 INTS6Q9UL03 887 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-216ENST00000543995 C3orf70A6NLC5 250 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TIMM44O43615 452 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 DCNP07585 359 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 SERPINB6P35237 376 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TIE1P35590 1138 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 CETN2P41208 172 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PEX5P50542 639 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 NDST2P52849 883 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 PLK1P53350 603 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 LLGL1Q15334 1064 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 RPS6KA1Q15418 735 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 C2orf27AQ580R0 203 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 TFDP3Q5H9I0 405 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MEI1Q5TIA1 1274 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 EMC10Q5UCC4 262 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 KAZNQ674X7 775 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 MFSD7Q6UXD7 560 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 SPOCD1Q6ZMY3 1216 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 VSIG1Q86XK7 387 aa14.84□□□□□ -0.03
TNFRSF1A-216ENST00000543995 UMODL1-AS1Q8N2C9 162 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms