RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ROPN1Q9HAT0 212 aaPredicted RBP17.31■□□□□ 0.36
COPS3-212ENST00000539941 ETNK1Q9HBU6 452 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 TMBIM4Q9HC24 238 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 ENTPD7Q9NQZ7 604 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 EIF2B3Q9NR50 452 aaKnown RBP17.31■□□□□ 0.36
COPS3-212ENST00000539941 DNAJC17Q9NVM6 304 aaKnown RBP17.31■□□□□ 0.36
COPS3-212ENST00000539941 TMEM248Q9NWD8 314 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 IGSF9Q9P2J2 1179 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 TRHDEQ9UKU6 1024 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 DOCK4Q8N1I0 1966 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 DRGXA6NNA5 263 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 CCNCP24863 283 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 HARS2P49590 506 aaKnown RBP17.3■□□□□ 0.36
COPS3-212ENST00000539941 PDIA2Q13087 525 aaKnown RBP17.3■□□□□ 0.36
COPS3-212ENST00000539941 CRYMQ14894 314 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 KYNUQ16719 465 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 PARP6Q2NL67 630 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 PREPLQ4J6C6 727 aaPredicted RBP17.3■□□□□ 0.36
COPS3-212ENST00000539941 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 TP53INP2Q8IXH6 220 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 UMODL1-AS1Q8N2C9 162 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 TAB3Q8N5C8 712 aaPredicted RBP17.3■□□□□ 0.36
COPS3-212ENST00000539941 MRPL43Q8N983 215 aaKnown RBP17.3■□□□□ 0.36
COPS3-212ENST00000539941 OR2W6PQ8NHA6 318 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 SPPL3Q8TCT6 385 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 MCM8Q9UJA3 840 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 GGA2Q9UJY4 613 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 ANAPC1Q9H1A4 1944 aa17.3■□□□□ 0.36
COPS3-212ENST00000539941 HMGB1P1B2RPK0 211 aaPredicted RBP17.29■□□□□ 0.36
COPS3-212ENST00000539941 GOLGA8MH3BSY2 632 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 METTL18O95568 372 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ACSL3O95573 720 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 LRG1P02750 347 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 F11P03951 625 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 HMBSP08397 361 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 TSHRP16473 764 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 PTPN3P26045 913 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 SLC11A2P49281 568 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 NDST2P52849 883 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 KRT71Q3SY84 523 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 C5orf22Q49AR2 442 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 AGBL2Q5U5Z8 902 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 FBXL22Q6P050 247 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ZNF567Q8N184 647 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ATPAF2Q8N5M1 289 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ARL8AQ96BM9 186 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 TLR9Q9NR96 1032 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 SEPT10Q9P0V9 454 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 COL6A3P12111 3177 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 NUP205Q92621 2012 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 GOLGA6CA6NDK9 693 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 C2orf71A6NGG8 1288 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 E7EVH7 732 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ACSL4O60488 711 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 TCEA3O75764 348 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 GLUD1P00367 558 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 APRTP07741 180 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 GOLGA6DP0CG33 693 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 IRAK1P51617 712 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ERVFC1P60507 584 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 SARNPP82979 210 aaKnown RBP17.29■□□□□ 0.36
COPS3-212ENST00000539941 TTMPQ5BVD1 217 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 FNBP1LQ5T0N5 605 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 RAP1GAP2Q684P5 730 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ITPRIPL1Q6GPH6 555 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 TIGD7Q6NT04 549 aaPredicted RBP17.29■□□□□ 0.36
COPS3-212ENST00000539941 TMEM150AQ86TG1 271 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 CHSY1Q86X52 802 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ZBED8Q8IZ13 594 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 ELMOD1Q8N336 334 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 DEFB123Q8N688 67 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 NETO2Q8NC67 525 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 KREMEN2Q8NCW0 462 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 MAGEC3Q8TD91 643 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 POF1BQ8WVV4 589 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 FATE1Q969F0 183 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 CELF6Q96J87 481 aaKnown RBP17.29■□□□□ 0.36
COPS3-212ENST00000539941 ATP6V1G3Q96LB4 118 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 C9orf72Q96LT7 481 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 SAMD11Q96NU1 681 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 IL21Q9HBE4 155 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 XAB2Q9HCS7 855 aaKnown RBP17.29■□□□□ 0.36
COPS3-212ENST00000539941 ALG13Q9NP73 1137 aaKnown RBP17.29■□□□□ 0.36
COPS3-212ENST00000539941 GOLGA6AQ9NYA3 693 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 MPP6Q9NZW5 540 aa17.29■□□□□ 0.36
COPS3-212ENST00000539941 KLHL8Q9P2G9 620 aaPredicted RBP17.29■□□□□ 0.36
COPS3-212ENST00000539941 F5H5T6 163 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 LPXNO60711 386 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 SHBGP04278 402 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 C8AP07357 584 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 TACR2P21452 398 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 CCT5P48643 541 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 MAPKAPK2P49137 400 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 KCNQ1P51787 676 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 STAT4Q14765 748 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 TEX44Q53QW1 395 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 C6orf118Q5T5N4 469 aa17.28■□□□□ 0.36
COPS3-212ENST00000539941 FAXCQ5TGI0 409 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms