RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 HADHAP40939 763 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 PTPN9P43378 593 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 KHKP50053 298 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 NIPAL4Q0D2K0 466 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM196Q5HYL7 178 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 NT5DC1Q5TFE4 455 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 ARHGAP40Q5TG30 622 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 CACHD1Q5VU97 1274 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 ATG9BQ674R7 924 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 CFAP161Q6P656 301 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 FASTKD5Q7L8L6 764 aaKnown RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 GALNT7Q86SF2 657 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 PHLDB2Q86SQ0 1253 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 CIR1Q86X95 450 aaPredicted RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 SIAH3Q8IW03 269 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 ADGRG5Q8IZF4 528 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 SUPT20HQ8NEM7 779 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 MOSPD2Q8NHP6 518 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 BBS10Q8TAM1 723 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 DNAAF4Q8WXU2 420 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 PPP2R3CQ969Q6 453 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 RMDN1Q96DB5 314 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 RAB3IPQ96QF0 476 aaPredicted RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 C17orf80Q9BSJ5 609 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 SAP30LQ9HAJ7 183 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 SYBUQ9NX95 663 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 CLIC5Q9NZA1 410 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 KCND2Q9NZV8 630 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 SEC63Q9UGP8 760 aaKnown RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 OSGIN1Q9UJX0 560 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 ZFR2Q9UPR6 939 aaKnown RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 MTMR6Q9Y217 621 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 WBP11Q9Y2W2 641 aaKnown RBP1.15□□□□□ -2.22
HIF1A-204ENST00000539097 RPGRIP1LQ68CZ1 1315 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM94Q12767 1356 aa1.15□□□□□ -2.22
HIF1A-204ENST00000539097 FNDC1Q4ZHG4 1894 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 C17orf113A0A1B0GUU1 675 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RASAL1O95294 804 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 IFNA2P01563 188 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CYP1A1P04798 512 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 HOXB9P17482 250 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TFEBP19484 476 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PRKAR1BP31321 381 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 AFF3P51826 1226 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RNASE9P60153 205 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 RAE1P78406 368 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 EEF1A2Q05639 463 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SEC23BQ15437 767 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CYP2A13Q16696 494 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF766Q5HY98 468 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 HAUS3Q68CZ6 603 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FAM198BQ6UWH4 519 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 OLFM4Q6UX06 510 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 KRBA2Q6ZNG9 492 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FTSJ3Q8IY81 847 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 OR52N4Q8NGI2 321 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CPT1BQ92523 772 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 STAMQ92783 540 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ARHGEF2Q92974 986 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FAM136AQ96C01 138 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 WDFY2Q96P53 400 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PRR25Q96S07 402 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 MPHOSPH8Q99549 860 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PRPF18Q99633 342 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 WDR83Q9BRX9 315 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FAM167BQ9BTA0 163 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TOR3AQ9H497 397 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SCPEP1Q9HB40 452 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PCDH9Q9HC56 1237 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 HAUS2Q9NVX0 235 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 EXTL2Q9UBQ6 330 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SLC27A6Q9Y2P4 619 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ARID1BQ8NFD5 2236 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CCDC187A0A096LP49 1063 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 A0A1B0GTW7 788 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 A0A1W2PQF6 199 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 VWA3AA6NCI4 1184 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 SPDEFO95238 335 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 IGHDP01880 384 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 HEXAP06865 529 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CFPP27918 469 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TCF7P36402 384 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 GCLCP48506 637 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TPTEP56180 551 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 GOLGA8FQ08AF8 430 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 MEA1Q16626 185 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 GSTA3Q16772 222 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CCDC96Q2M329 555 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 AASDHQ4L235 1098 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TTC39AQ5SRH9 613 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 MEX3CQ5U5Q3 659 aaKnown RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CEP85Q6P2H3 762 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 GJB7Q6PEY0 223 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FBXO38Q6PIJ6 1188 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 FOXR2Q6PJQ5 311 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 PRRT2Q7Z6L0 340 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 TFAP2DQ7Z6R9 452 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 ABRAQ8N0Z2 381 aa1.15□□□□□ -2.23
HIF1A-204ENST00000539097 C12orf76Q8N812 135 aaPredicted RBP1.15□□□□□ -2.23
HIF1A-204ENST00000539097 CEP70Q8NHQ1 597 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms