RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 LMAN2Q12907 356 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 SLC10A2Q12908 348 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 CDH18Q13634 790 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 SLC44A4Q53GD3 710 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 RNF219Q5W0B1 726 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 NCBP2-AS2Q69YL0 99 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 C1orf228Q6PIY5 440 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 KIAA0907Q7Z7F0 614 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 SETD3Q86TU7 594 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 SLC13A5Q86YT5 568 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 CCDC117Q8IWD4 279 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 ARHGAP12Q8IWW6 846 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 TP53INP2Q8IXH6 220 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 PHTF2Q8N3S3 785 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 RASGEF1CQ8N431 466 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 NPWQ8N729 165 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 NETO2Q8NC67 525 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 ALG14Q96F25 216 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 CELF6Q96J87 481 aaKnown RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 MS4A14Q96JA4 679 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 C8orf33Q9H7E9 229 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 HEBP1Q9NRV9 189 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 DONSONQ9NYP3 566 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 DEC1Q9P2X7 70 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 OR51B4Q9Y5P0 310 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 SAR1BQ9Y6B6 198 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 PIAS3Q9Y6X2 628 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 MYO10Q9HD67 2058 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 TCF20Q9UGU0 1960 aaKnown RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 RASA4BC9J798 803 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 SPECC1L-ADORA2AF8WAN1 911 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 RASA4O43374 803 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 MFSD11O43934 449 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 RAMP2O60895 175 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 TJP3O95049 919 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 RHOCP08134 193 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 GLULP15104 373 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 CTHP32929 405 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 ACVRL1P37023 503 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 DGKGP49619 791 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 NDST2P52849 883 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 GNA12Q03113 381 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 GBE1Q04446 702 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 KLF1Q13351 362 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 GRAMD4Q6IC98 578 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 NPNTQ6UXI9 565 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF783Q6ZMS7 281 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 RALGPS2Q86X27 583 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF557Q8N988 423 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 OR7D4Q8NG98 312 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF592Q92610 1267 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 FEM1AQ9BSK4 669 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 SLC39A8Q9C0K1 460 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 MAGEH1Q9H213 219 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 LRRC19Q9H756 370 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 ABCB8Q9NUT2 735 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 DTLQ9NZJ0 730 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 KIAA1522Q9P206 1035 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 SAE1Q9UBE0 346 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 TTC7AQ9ULT0 858 aaPredicted RBP12.22□□□□□ -0.45
COMMD9-208ENST00000533643 SLC27A6Q9Y2P4 619 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 COL4A3Q01955 1670 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 MYOFQ9NZM1 2061 aa12.22□□□□□ -0.45
COMMD9-208ENST00000533643 COL4A2P08572 1712 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 A0A0D9SEW6 157 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 SHISA7A6NL88 538 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 FGGP02679 453 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 PECAM1P16284 738 aaPredicted RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 TGM2P21980 687 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 SERPINB6P35237 376 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 EIF2DP41214 584 aaKnown RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 CSKP41240 450 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 GALK1P51570 392 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 PLK1P53350 603 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 OXCT1P55809 520 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 YBEYP58557 167 aaPredicted RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 KDSRQ06136 332 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 SLC12A1Q13621 1099 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 POLD3Q15054 466 aaPredicted RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 PARP15Q460N3 678 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 TXNDC11Q6PKC3 985 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 ADAT2Q7Z6V5 191 aaKnown RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 UBALD2Q8IYN6 164 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 APCDD1Q8J025 514 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 HMCESQ96FZ2 354 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 PNKPQ96T60 521 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 ACE2Q9BYF1 805 aaPredicted RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 MUC3BQ9H195 1237 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 FBRSL1Q9HCM7 1045 aaKnown RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 SMARCAL1Q9NZC9 954 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 MUTYHQ9UIF7 546 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 GGA2Q9UJY4 613 aa12.21□□□□□ -0.45
COMMD9-208ENST00000533643 INTS6Q9UL03 887 aaKnown RBP12.21□□□□□ -0.45
COMMD9-208ENST00000533643 R3HDM2Q9Y2K5 976 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms