RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 FAF2Q96CS3 445 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 NAPGQ99747 312 aaPredicted RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 MAK16Q9BXY0 300 aaKnown RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 TRPV5Q9NQA5 729 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 RCOR3Q9P2K3 495 aaPredicted RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 WASH4PA8MWX3 477 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 APOL1O14791 398 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 CISD3P0C7P0 127 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 HLA-FP30511 346 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 ACVRL1P37023 503 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 HCAR3P49019 387 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 MAPKAPK2P49137 400 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 GALK1P51570 392 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 GEN1Q17RS7 908 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 TFDP3Q5H9I0 405 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 MPP7Q5T2T1 576 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 TMCO3Q6UWJ1 677 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 NYAP1Q6ZVC0 841 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 ADAT2Q7Z6V5 191 aaKnown RBP14.08□□□□□ -0.16
CD44-224ENST00000526669 ZNF354CQ86Y25 554 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 APCDD1Q8J025 514 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 FIBINQ8TAL6 211 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 LRRN4Q8WUT4 740 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 PNKPQ96T60 521 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 OSBPL8Q9BZF1 889 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 MUC3BQ9H195 1237 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 NOL6Q9H6R4 1146 aaKnown RBP14.08□□□□□ -0.16
CD44-224ENST00000526669 C8orf33Q9H7E9 229 aaPredicted RBP14.08□□□□□ -0.16
CD44-224ENST00000526669 FBRSL1Q9HCM7 1045 aaKnown RBP14.08□□□□□ -0.16
CD44-224ENST00000526669 ARHGEF3Q9NR81 526 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 DEC1Q9P2X7 70 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 GGA2Q9UJY4 613 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 NDRG2Q9UN36 371 aaKnown RBP14.08□□□□□ -0.16
CD44-224ENST00000526669 VCANP13611 3396 aa14.08□□□□□ -0.16
CD44-224ENST00000526669 A0A0D9SEW6 157 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 KRBA1A5PL33 1030 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 ANTXRLA6NF34 631 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 DFFAO00273 331 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 CEP104O60308 925 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 CST8O60676 142 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 APODP05090 189 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 PABPC1P11940 636 aaKnown RBP14.07□□□□□ -0.16
CD44-224ENST00000526669 GLDCP23378 1020 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 CASQ1P31415 396 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 CETN2P41208 172 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 ETF1P62495 437 aaKnown RBP14.07□□□□□ -0.16
CD44-224ENST00000526669 ZXDAP98168 799 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 PPP2R5EQ16537 467 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 TAZQ16635 292 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 FUT11Q495W5 492 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 C6orf118Q5T5N4 469 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 RALGPS2Q86X27 583 aaPredicted RBP14.07□□□□□ -0.16
CD44-224ENST00000526669 ARHGAP12Q8IWW6 846 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 UBALD2Q8IYN6 164 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 SIX5Q8N196 739 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 PHTF2Q8N3S3 785 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 PLD5Q8N7P1 536 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 HMCESQ96FZ2 354 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 LMLNQ96KR4 655 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 OSBPL9Q96SU4 736 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 P2RY13Q9BPV8 354 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 SPON2Q9BUD6 331 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 SLC39A8Q9C0K1 460 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 KLC2Q9H0B6 622 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 SMARCAL1Q9NZC9 954 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 KIAA1522Q9P206 1035 aaPredicted RBP14.07□□□□□ -0.16
CD44-224ENST00000526669 FBXO10Q9UK96 956 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 INTS6Q9UL03 887 aaKnown RBP14.07□□□□□ -0.16
CD44-224ENST00000526669 TBC1D30Q9Y2I9 924 aa14.07□□□□□ -0.16
CD44-224ENST00000526669 TCRBV7S2A1N4TA0A589 114 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 CTAGE9A4FU28 777 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SHISA7A6NL88 538 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 ZNF487B1APH4 448 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 RASA4BC9J798 803 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 ZNF185O15231 689 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 RASA4O43374 803 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SNAP91O60641 907 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 RAMP2O60895 175 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 EGFP01133 1207 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 PECAM1P16284 738 aaPredicted RBP14.06□□□□□ -0.16
CD44-224ENST00000526669 SEC13P55735 322 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 COPS2P61201 443 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 AMPD2Q01433 879 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 GNA12Q03113 381 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 GBE1Q04446 702 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 TFDP2Q14188 446 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 POLD3Q15054 466 aaPredicted RBP14.06□□□□□ -0.16
CD44-224ENST00000526669 PLEKHG6Q3KR16 790 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 PITRM1Q5JRX3 1037 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 CCDC181Q5TID7 509 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 TMEM215Q68D42 235 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SLC9A4Q6AI14 798 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 FSTL4Q6MZW2 842 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 ARHGAP36Q6ZRI8 547 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 B4GALNT4Q76KP1 1039 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SETD3Q86TU7 594 aaPredicted RBP14.06□□□□□ -0.16
CD44-224ENST00000526669 VSIG1Q86XK7 387 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 TERB1Q8NA31 727 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 COG1Q8WTW3 980 aa14.06□□□□□ -0.16
CD44-224ENST00000526669 SORCS1Q8WY21 1168 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms