RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CYP1A2P05177 515 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 HOXC6P09630 235 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 GYS1P13807 737 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 KLRC2P26717 231 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 TNFSF8P32971 234 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 GRK5P34947 590 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 TM4SF4P48230 202 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 TMPRSS3P57727 454 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 TLE3Q04726 772 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 CRYZQ08257 329 aaKnown RBP2.54□□□□□ -2
PDGFC-208ENST00000512711 PKP1Q13835 747 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 GALNT3Q14435 633 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 ZNF628Q5EBL2 1059 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 DCAF12L2Q5VW00 463 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 IL31Q6EBC2 164 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 TMEM71Q6P5X7 295 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 KSR2Q6VAB6 950 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 Q6ZSV7 163 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 ZNF367Q7RTV3 350 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 TMEM200AQ86VY9 491 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 NR2C2APQ86WQ0 139 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 FAM217AQ8IXS0 508 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 OR2C3Q8N628 320 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 GABPB2Q8TAK5 448 aaPredicted RBP2.54□□□□□ -2
PDGFC-208ENST00000512711 ELP5Q8TE02 316 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 DNASE2BQ8WZ79 361 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 REXO5Q96IC2 774 aaKnown RBP2.54□□□□□ -2
PDGFC-208ENST00000512711 CCDC138Q96M89 665 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 EIF2AQ9BY44 585 aaKnown RBP2.54□□□□□ -2
PDGFC-208ENST00000512711 TASP1Q9H6P5 420 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 RMI1Q9H9A7 625 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 SEPSECSQ9HD40 501 aaKnown RBP2.54□□□□□ -2
PDGFC-208ENST00000512711 HIF1ANQ9NWT6 349 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 PLK2Q9NYY3 685 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 ZNF112Q9UJU3 913 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 MYO6Q9UM54 1294 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 TNFSF13BQ9Y275 285 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 CEP83Q9Y592 693 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 PCDHA10Q9Y5I2 948 aa2.54□□□□□ -2
PDGFC-208ENST00000512711 COPG1Q9Y678 874 aaKnown RBP2.54□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3DA0A087WVF3 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3IA0A087WXS9 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3EA0A087X179 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3KA0A087X1G2 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 EME2A4GXA9 379 aaPredicted RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3BA6NDS4 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 FAM90A18PA6NE21 464 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3FA6NER0 549 aaPredicted RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 FAM90A16PA6NEW6 464 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 AGAP5A6NIR3 686 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 FAM90A9PA6NNJ1 464 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 FAM90A5PA8MXJ8 464 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3LB9A6J9 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 MCIDASD6RGH6 385 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 HNRNPDLO14979 420 aaKnown RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 SPRY3O43610 288 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 KLKB1P03952 638 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 ALDOAP04075 364 aaKnown RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 FAM90A15PP0C7V4 464 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 FAM90A14PP0C7W9 464 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3HP0C7X1 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 FGF3P11487 239 aaPredicted RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 ARSBP15848 533 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 NPPBP16860 134 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 ABCB4P21439 1286 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 ITGB8P26012 769 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 AKT1P31749 480 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 SLC16A2P36021 539 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 ENTPD1P49961 510 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 RASSF2P50749 326 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 RBM6P78332 1123 aaKnown RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 ROR2Q01974 943 aaKnown RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 RHAGQ02094 409 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 GPR18Q14330 331 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 DUSP6Q16828 381 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 FNBP1LQ5T0N5 605 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3GQ6DHY5 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 NADSYN1Q6IA69 706 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3CQ6IPX1 549 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 GGT6Q6P531 493 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 ARMC9Q7Z3E5 817 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 CCAR1Q8IX12 1150 aaKnown RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 TBC1D3Q8IZP1 549 aaPredicted RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 SLC25A41Q8N5S1 370 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 NEXN-AS1Q8NBZ9 246 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 PRPF18Q99633 342 aaKnown RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 HDHD5Q9BXW7 423 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 B3GNT4Q9C0J1 378 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 CERS4Q9HA82 394 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 PNRC2Q9NPJ4 139 aaKnown RBP2.53□□□□□ -2
PDGFC-208ENST00000512711 TM7SF3Q9NS93 570 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 PHTF1Q9UMS5 762 aa2.53□□□□□ -2
PDGFC-208ENST00000512711 SLC38A8A6NNN8 435 aa2.52□□□□□ -2.01
PDGFC-208ENST00000512711 STMND1H3BQB6 276 aa2.52□□□□□ -2.01
PDGFC-208ENST00000512711 ACOT8O14734 319 aa2.52□□□□□ -2.01
PDGFC-208ENST00000512711 ASNA1O43681 348 aa2.52□□□□□ -2.01
PDGFC-208ENST00000512711 TNFRSF6BO95407 300 aa2.52□□□□□ -2.01
PDGFC-208ENST00000512711 ZBTB11O95625 1053 aaPredicted RBP2.52□□□□□ -2.01
PDGFC-208ENST00000512711 GLP2RO95838 553 aa2.52□□□□□ -2.01
PDGFC-208ENST00000512711 CYP21A2P08686 494 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms