RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FCRLBQ6BAA4 426 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 CRTC1Q6UUV9 634 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 BHLHA9Q7RTU4 235 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 KRT73Q86Y46 540 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 GLIS1Q8NBF1 620 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 CCDC150Q8NCX0 1101 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 R3HDM4Q96D70 268 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 PARK7Q99497 189 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 VN1R3Q9BXE9 311 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 STK33Q9BYT3 514 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 WDR12Q9GZL7 423 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 SLC28A3Q9HAS3 691 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 ZBTB26Q9HCK0 441 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 ARHGEF3Q9NR81 526 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 SERTAD4Q9NUC0 356 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 RGL1Q9NZL6 768 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 DNAJB11Q9UBS4 358 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF70Q9UC06 446 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 CDC23Q9UJX2 597 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 DRG1Q9Y295 367 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 AOX1Q06278 1338 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 HEG1Q9ULI3 1381 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 LRRC37AA6NMS7 1700 aa4.12□□□□□ -1.75
TOPBP1-208ENST00000511439 OTOFQ9HC10 1997 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 FAM234BA2RU67 622 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 LINC00473A8K010 186 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 AGPSO00116 658 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 ADAMTS3O15072 1205 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 TPD52L2O43399 206 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 COQ9O75208 318 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 TTLL1O95922 423 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 CELA2AP08217 269 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 IDEP14735 1019 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 JUPP14923 745 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 EGR1P18146 543 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 MST1P26927 711 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 TECP42680 631 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 MMP14P50281 582 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 TIRAPP58753 221 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 CHAF1AQ13111 956 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 KRT72Q14CN4 511 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 SRSF7Q16629 238 aaKnown RBP eCLIP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 RAP1GAP2Q684P5 730 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 SUMO4Q6EEV6 95 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 MRNIPQ6NTE8 343 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF551Q7Z340 670 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 CAND1Q86VP6 1230 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 CCDC28AQ8IWP9 274 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 SYTL1Q8IYJ3 562 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 ENAHQ8N8S7 591 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 RP9Q8TA86 221 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 TMEM41AQ96HV5 264 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 ARPC5LQ9BPX5 153 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 TTLL2Q9BWV7 592 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 UPF3BQ9BZI7 483 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 SLC25A32Q9H2D1 315 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 NECTIN3Q9NQS3 549 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 TM7SF3Q9NS93 570 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 FLRT1Q9NZU1 646 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 LRCH1Q9Y2L9 728 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 GAKO14976 1311 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 MYO3BQ8WXR4 1341 aa4.11□□□□□ -1.75
TOPBP1-208ENST00000511439 FAM186AA6NE01 2351 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 WIPF3A6NGB9 483 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 PDHXO00330 501 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 PODXLO00592 558 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 ARP10275 920 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 NTSR1P30989 418 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 SLC5A2P31639 672 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 TNFAIP2Q03169 654 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 MAPK7Q13164 816 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 GRAPQ13588 217 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 FHL3Q13643 280 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 VGLL4Q14135 290 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 MAPKAPK3Q16644 382 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 SLC5A9Q2M3M2 681 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 FAXCQ5TGI0 409 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 CCDC174Q6PII3 467 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 FBXO38Q6PIJ6 1188 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 USP49Q70CQ1 688 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 WDR53Q7Z5U6 358 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 ANKRD23Q86SG2 305 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 VPS37AQ8NEZ2 397 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 GRAPLQ8TC17 118 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 XAGE5Q8WWM1 108 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 C18orf8Q96DM3 657 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF778Q96MU6 729 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 HIST1H2AAQ96QV6 131 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 HAPLN3Q96S86 360 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 CRB3Q9BUF7 120 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 SEMA4CQ9C0C4 833 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 ZCWPW1Q9H0M4 648 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 PCDHAC1Q9H158 963 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 DLL3Q9NYJ7 618 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 TMOD4Q9NZQ9 345 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 SLC39A10Q9ULF5 831 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 RIMKLBQ9ULI2 386 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 MTCH2Q9Y6C9 303 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms