RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 MRPL58Q14197 206 aaKnown RBP17.13■□□□□ 0.33
TOM1-216ENST00000492723 TCTN1Q2MV58 587 aa17.13■□□□□ 0.33
TOM1-216ENST00000492723 ATPAF2Q8N5M1 289 aa17.13■□□□□ 0.33
TOM1-216ENST00000492723 CDKL2Q92772 493 aa17.13■□□□□ 0.33
TOM1-216ENST00000492723 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
TOM1-216ENST00000492723 MLPHQ9BV36 600 aaPredicted RBP17.13■□□□□ 0.33
TOM1-216ENST00000492723 VPS11Q9H270 941 aa17.13■□□□□ 0.33
TOM1-216ENST00000492723 MARCH5Q9NX47 278 aa17.13■□□□□ 0.33
TOM1-216ENST00000492723 SLC27A5Q9Y2P5 690 aa17.13■□□□□ 0.33
TOM1-216ENST00000492723 OR6C75A6NL08 312 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 KCNU1A8MYU2 1149 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 POLBP06746 335 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 MAGEA11P43364 429 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 TUBP50607 506 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 PRMT2P55345 433 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 MANEALQ5VSG8 457 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 ARHGAP12Q8IWW6 846 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 PLCD4Q9BRC7 762 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 SLC13A1Q9BZW2 595 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 IL1RAPL1Q9NZN1 696 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 VANGL2Q9ULK5 521 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 HS3ST4Q9Y661 456 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 RPS6KL1Q9Y6S9 549 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 HMX2A2RU54 273 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 ERI2A8K979 691 aaKnown RBP17.12■□□□□ 0.33
TOM1-216ENST00000492723 FGFR3P22607 806 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 HOXC13P31276 330 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 ETV4P43268 484 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 FAM133BQ5BKY9 247 aaKnown RBP17.12■□□□□ 0.33
TOM1-216ENST00000492723 KCTD11Q693B1 232 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 ARHGAP18Q8N392 663 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 ZNF276Q8N554 614 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 APBB2Q92870 758 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 APOL2Q9BQE5 337 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 NDFIP2Q9NV92 336 aa17.12■□□□□ 0.33
TOM1-216ENST00000492723 MAGED2Q9UNF1 606 aaPredicted RBP17.12■□□□□ 0.33
TOM1-216ENST00000492723 E9PAM4 449 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 HTR7P34969 479 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 NIPAL4Q0D2K0 466 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 FUT10Q6P4F1 479 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 MARK2Q7KZI7 788 aaKnown RBP17.11■□□□□ 0.33
TOM1-216ENST00000492723 C14orf80Q86SX3 495 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 TET1Q8NFU7 2136 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 ZSCAN18Q8TBC5 510 aaPredicted RBP17.11■□□□□ 0.33
TOM1-216ENST00000492723 DPF3Q92784 378 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 SCLYQ96I15 445 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 RMDN2Q96LZ7 410 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 BFARQ9NZS9 450 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 MPP6Q9NZW5 540 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 TLR6Q9Y2C9 796 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 HGSO14964 777 aaPredicted RBP17.11■□□□□ 0.33
TOM1-216ENST00000492723 DHRS4L1P0CG22 281 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 NEFHP12036 1026 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 CCNB1P14635 433 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 CCNCP24863 283 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 EFEMP1Q12805 493 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 OTOP3Q7RTS5 596 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 OTOAQ7RTW8 1153 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 NPAS4Q8IUM7 802 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 LZTR1Q8N653 840 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 CNTD1Q8N815 330 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 FBXO32Q969P5 355 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 SEPT5Q99719 369 aaPredicted RBP17.11■□□□□ 0.33
TOM1-216ENST00000492723 SEZ6LQ9BYH1 1024 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 SLC39A8Q9C0K1 460 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 CASS4Q9NQ75 786 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 PCMTD2Q9NV79 361 aa17.11■□□□□ 0.33
TOM1-216ENST00000492723 TBKBP1A7MCY6 615 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 ERVK-10P10266 1014 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 YWHAQP27348 245 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 TBX4P57082 545 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 ZNF33AQ06730 810 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 PRPSAP1Q14558 356 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 MGAT5BQ3V5L5 792 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 MSANTD2Q6P1R3 559 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 RSPO2Q6UXX9 243 aaPredicted RBP17.1■□□□□ 0.33
TOM1-216ENST00000492723 RASSF3Q86WH2 238 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 PTPRN2Q92932 1015 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 DEFB118Q96PH6 123 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 TSGA13Q96PP4 275 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 LRRC40Q9H9A6 602 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 UBOX5O94941 541 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 CNTFP26441 200 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 MLLT6P55198 1093 aaPredicted RBP17.1■□□□□ 0.33
TOM1-216ENST00000492723 HTRA3P83110 453 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 MGAT5Q09328 741 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 SPANXN3Q5MJ09 141 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 ARTNQ5T4W7 220 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 PIK3R6Q5UE93 754 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 PACS1Q6VY07 963 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
TOM1-216ENST00000492723 NDUFAF2Q8N183 169 aa17.1■□□□□ 0.33
TOM1-216ENST00000492723 ZNF669Q96BR6 464 aaPredicted RBP17.1■□□□□ 0.33
TOM1-216ENST00000492723 FCRL3Q96P31 734 aaPredicted RBP17.1■□□□□ 0.33
TOM1-216ENST00000492723 ZFATQ9P243 1243 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms