RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 C1RP00736 705 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 RB1P06400 928 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 APRTP07741 180 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 HMBSP08397 361 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 CNPP09543 421 aaKnown RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 LINC00271P0C7V0 271 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 VAV1P15498 845 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 SYN1P17600 705 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 CCNCP24863 283 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ATP5DP30049 168 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 SLC11A2P49281 568 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 HARS2P49590 506 aaKnown RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 NDST2P52849 883 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ZNF844Q08AG5 666 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 CBLBQ13191 982 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 SEMA5AQ13591 1074 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PRPSAP1Q14558 356 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PARP6Q2NL67 630 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ANO4Q32M45 955 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 BBS9Q3SYG4 887 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 DNAJC21Q5F1R6 531 aaKnown RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 MS4A13Q5J8X5 152 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 RABGAP1LQ5R372 815 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PIK3R6Q5UE93 754 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ANKRD22Q5VYY1 191 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 TIGD7Q6NT04 549 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 RTL10Q7L3V2 364 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PID1Q7Z2X4 250 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 DNAJB7Q7Z6W7 309 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 CHSY1Q86X52 802 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PALM2Q8IXS6 379 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ZBED8Q8IZ13 594 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 TAB3Q8N5C8 712 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ATPAF2Q8N5M1 289 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 CCDC33Q8N5R6 958 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ARFGAP2Q8N6H7 521 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 NPWQ8N729 165 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ATP11CQ8NB49 1132 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 OR2W6PQ8NHA6 318 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 FAM76AQ8TAV0 307 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PYROXD1Q8WU10 500 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 AZIN2Q96A70 460 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 LRRC39Q96DD0 335 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ATP6V1G3Q96LB4 118 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 C9orf72Q96LT7 481 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 SAMD11Q96NU1 681 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 TSGA13Q96PP4 275 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PPP1R2P1Q96PQ5 205 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 KLHL5Q96PQ7 755 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 GCNAQ96QF7 691 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 EPB41L4BQ9H329 900 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 PPCSQ9HAB8 311 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 XAB2Q9HCS7 855 aaKnown RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 TMEM248Q9NWD8 314 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 BCCIPQ9P287 314 aaKnown RBP eCLIP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 KLHL8Q9P2G9 620 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 IGSF9Q9P2J2 1179 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 VANGL2Q9ULK5 521 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 ZMYND8Q9ULU4 1186 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 IRAK3Q9Y616 596 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 GBF1Q92538 1859 aa7.23□□□□□ -1.25
SF3A3-206ENST00000487062 MYO18AQ92614 2054 aaKnown RBP7.23□□□□□ -1.25
SF3A3-206ENST00000487062 NYNRINQ9P2P1 1898 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TLDC2A0PJX2 215 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 DRGXA6NNA5 263 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 A6NNZ2 444 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 ERI2A8K979 691 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 MATN3O15232 486 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 RGS16O15492 202 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 COCHO43405 550 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TGM5O43548 720 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 SPAG6O75602 509 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TMEM63AO94886 807 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 METTL18O95568 372 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 FGF19O95750 216 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 LATS1O95835 1130 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 GLUD1P00367 558 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 MBL2P11226 248 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 MLNP12872 115 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TACR2P21452 398 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 PTPN3P26045 913 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 MAPKAPK2P49137 400 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 NRLP54845 237 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 YBEYP58557 167 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 GABPB1Q06547 395 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 WASHC5Q12768 1159 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TUBB8Q3ZCM7 444 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 CCDC38Q502W7 563 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TEX44Q53QW1 395 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 FAXCQ5TGI0 409 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 TMEM164Q5U3C3 297 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 RAP1GAP2Q684P5 730 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 PDE12Q6L8Q7 609 aaKnown RBP7.22□□□□□ -1.25
SF3A3-206ENST00000487062 LILRA6Q6PI73 481 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 ELMSAN1Q6PJG2 1045 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 C14orf80Q86SX3 495 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 ZNF567Q8N184 647 aa7.22□□□□□ -1.25
SF3A3-206ENST00000487062 UMODL1-AS1Q8N2C9 162 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms