RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ME2P23368 584 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MSX2P35548 267 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 CBLBQ13191 982 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 SQLEQ14534 574 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MESDQ14696 234 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 GRM3Q14832 879 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TIGD6Q17RP2 521 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ANKRD40Q6AI12 368 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ARL9Q6T311 187 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 RBM43Q6ZSC3 357 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 GAS2L3Q86XJ1 694 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TMEM145Q8NBT3 493 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TM9SF4Q92544 642 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 THAP9Q9H5L6 903 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 DCLRE1BQ9H816 532 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZFP57Q9NU63 452 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 INPP5FQ9Y2H2 1132 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZNF451Q9Y4E5 1061 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ASS1P00966 412 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 LDLRP01130 860 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ATP5A1P25705 553 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 PTH1RQ03431 593 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 PSMD5Q16401 504 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CYP2A13Q16696 494 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 SNAP47Q5SQN1 464 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 FAM98AQ8NCA5 519 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 OR7D4Q8NG98 312 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ERMAPQ96PL5 475 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 SLC4A5Q9BY07 1137 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 YTHDF1Q9BYJ9 559 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 LMAN2LQ9H0V9 348 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ANKRD12Q6UB98 2062 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MAGEB16A2A368 324 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CPED1A4D0V7 1026 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ARPC2O15144 300 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CLPXO76031 633 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZNF432O94892 652 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 RBP1P09455 135 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TMEM253P0C7T8 217 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ODC1P11926 461 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 FSHRP23945 695 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MZF1P28698 734 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 GTF2H1P32780 548 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MELKQ14680 651 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZNF169Q14929 603 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 QPRTQ15274 297 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 GPAT3Q53EU6 434 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 PITRM1Q5JRX3 1037 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CDKL4Q5MAI5 379 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 FAM26FQ5R3K3 315 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MSANTD2Q6P1R3 559 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 GHDCQ8N2G8 530 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 MEIOBQ8N635 442 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 KAT2AQ92830 837 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 XAGE2Q96GT9 111 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 RHOBTB2Q9BYZ6 727 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 NARFQ9UHQ1 456 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 A0A0G2JND7 137 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 PGRMC2O15173 223 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 PIP5K1CO60331 668 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 KERAO60938 352 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 RECQL5O94762 991 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 PRH1P02810 166 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CHRNGP07510 517 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 FAM153BP0C7A2 387 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ZNF12P17014 697 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TARSP26639 723 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 HTR1BP28222 390 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 THBS3P49746 956 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 XIAPP98170 497 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 HKDC1Q2TB90 917 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TMEM164Q5U3C3 297 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 C3orf33Q6P1S2 294 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 DNM1P34Q6PK57 102 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TMPRSS11AQ6ZMR5 421 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 KIAA0895Q8NCT3 520 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CCDC85AQ96PX6 553 aaPredicted RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 RANBP17Q9H2T7 1088 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 ATXN10Q9UBB4 475 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 GDAQ9Y2T3 454 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 SYNMO15061 1565 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 H0Y858 1186 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 DLX3O60479 287 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TFPTP0C1Z6 253 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 BMP4P12644 408 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 ALAS1P13196 640 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CDK10Q15131 360 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 SLC1A5Q15758 541 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 TMEM31Q5JXX7 168 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 NOL9Q5SY16 702 aaKnown RBP5.52□□□□□ -1.53
USF3-202ENST00000478658 CATSPEREQ5SY80 951 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 LRIF1Q5T3J3 769 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CREB3L3Q68CJ9 461 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 KBTBD2Q8IY47 623 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 SMURF1Q9HCE7 757 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 IKZF3Q9UKT9 509 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 GRIN2BQ13224 1484 aa5.52□□□□□ -1.53
USF3-202ENST00000478658 CYP3A7-CYP3A51PA0A087WV96 503 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms