RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 DIAPH2O60879 1101 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 AP2A1O95782 977 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 LTFP02788 710 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 ALDOAP04075 364 aaKnown RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 ITGA2BP08514 1039 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 PCSK1P29120 753 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 ELF1P32519 619 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 GP5P40197 560 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 CDK7P50613 346 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 CRADDP78560 199 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 PDE1BQ01064 536 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 DSTYKQ6XUX3 929 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 ZNF598Q86UK7 904 aaKnown RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 ARHGAP24Q8N264 748 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 PPP1R14CQ8TAE6 165 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 PCED1BQ96HM7 432 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 MIPEPQ99797 713 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 STN1Q9H668 368 aaKnown RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 DCLRE1BQ9H816 532 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 PAK6Q9NQU5 681 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 BFARQ9NZS9 450 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 ZFATQ9P243 1243 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 ADAM28Q9UKQ2 775 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 SORCS3Q9UPU3 1222 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 MAGEB16A2A368 324 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 NCAM1P13591 858 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 PTPN3P26045 913 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 SERPINB6P35237 376 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 PAN2Q504Q3 1202 aaKnown RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 FASTKD1Q53R41 847 aaKnown RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 C4orf50Q6ZRC1 276 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 WDR75Q8IWA0 830 aaKnown RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 IRGQQ8WZA9 623 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 HDAC11Q96DB2 347 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 CERS2Q96G23 380 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 SMARCD1Q96GM5 515 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 NUDCD1Q96RS6 583 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 FAM96AQ9H5X1 160 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 DENND2DQ9H6A0 471 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 TIMM13Q9Y5L4 95 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-208ENST00000476724 RPS6KL1Q9Y6S9 549 aa16.84■□□□□ 0.29
TMEM53-208ENST00000476724 AP3B1O00203 1094 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 TPP1O14773 563 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 PDE1CQ14123 709 aaPredicted RBP16.83■□□□□ 0.28
TMEM53-208ENST00000476724 UPP1Q16831 310 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 BSPRYQ5W0U4 402 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 ITPRIPL1Q6GPH6 555 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 RASSF3Q86WH2 238 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 UNC5BQ8IZJ1 945 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 ZMIZ2Q8NF64 920 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 MCUR1Q96AQ8 359 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 COLEC11Q9BWP8 271 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 NMUR2Q9GZQ4 415 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 RGS18Q9NS28 235 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 TAS2R1Q9NYW7 299 aa16.83■□□□□ 0.28
TMEM53-208ENST00000476724 HBS1LQ9Y450 684 aaKnown RBP16.83■□□□□ 0.28
TMEM53-208ENST00000476724 MYBPHLA2RUH7 354 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 F5H423 210 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-208ENST00000476724 FAM72CH0Y354 149 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 PLIN3O60664 434 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 TPBGLP0DKB5 382 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 GNAZP19086 355 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 GRK2P25098 689 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 DNAJB2P25686 324 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 N4BP2L1Q5TBK1 243 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-208ENST00000476724 FAM72AQ5TYM5 149 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 FAM72DQ6L9T8 149 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 LRRC8DQ7L1W4 858 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 TMEM135Q86UB9 458 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 FAM72BQ86X60 149 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 SCML4Q8N228 414 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 EPAS1Q99814 870 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 CEP41Q9BYV8 373 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 WDCPQ9H6R7 721 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 CSNK1G1Q9HCP0 422 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 CASS4Q9NQ75 786 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 DDIT4Q9NX09 232 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 TET1Q8NFU7 2136 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 CCDC195A0A1B0GUA6 201 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 CAPN14A8MX76 684 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 KCNK1O00180 336 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 USP1O94782 785 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 GSRP00390 522 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 SERPINA6P08185 405 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 USP17L7P0C7H9 530 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 SPRP35270 261 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-208ENST00000476724 NPY2RP49146 381 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 CXCR3P49682 368 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 AQP5P55064 265 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 ZNF33AQ06730 810 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 GPNMBQ14956 572 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 CES4AQ5XG92 561 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 MBLAC2Q68D91 279 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 TMPRSS6Q8IU80 811 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMEM53-208ENST00000476724 PIWIL2Q8TC59 973 aaKnown RBP16.82■□□□□ 0.28
TMEM53-208ENST00000476724 HASPINQ8TF76 798 aa16.82■□□□□ 0.28
TMEM53-208ENST00000476724 ISL2Q96A47 359 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms