RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CMTM5Q96DZ9 223 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 RIPOR3Q96MK2 946 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 RILPQ96NA2 401 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 ACAP3Q96P50 834 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 PRPF18Q99633 342 aaKnown RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 AMNQ9BXJ7 453 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 UNKQ9C0B0 810 aaKnown RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 DHX33Q9H6R0 707 aaKnown RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 SMYD3Q9H7B4 428 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 PARVGQ9HBI0 331 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 KCND2Q9NZV8 630 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 SIRPGQ9P1W8 387 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 HESX1Q9UBX0 185 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 CDH7Q9ULB5 785 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 GPC6Q9Y625 555 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 DOCK5Q9H7D0 1870 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 COPEO14579 308 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 GALR2O43603 387 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 SNNO75324 88 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 ITGAVP06756 1048 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 OCM2P0CE71 109 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 OCMP0CE72 109 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 GLRA2P23416 452 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 PTPN7P35236 360 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 VAMP7P51809 220 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 NEK2P51955 445 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 TMPRSS15P98073 1019 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 KCNA1Q09470 495 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 ZBTB17Q13105 803 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 AP3B2Q13367 1082 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 ALCAMQ13740 583 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 C16orf72Q14CZ0 275 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 TGFBIQ15582 683 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 LGSNQ5TDP6 509 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 RINT1Q6NUQ1 792 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 ARCQ7LC44 396 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 ZNF677Q86XU0 584 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 WDR75Q8IWA0 830 aaKnown RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 PALM2Q8IXS6 379 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 CMTR2Q8IYT2 770 aaKnown RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 MCOLN2Q8IZK6 566 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 DDHD1Q8NEL9 900 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 TSPAN14Q8NG11 270 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 RIN3Q8TB24 985 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 DNAJB3Q8WWF6 145 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 NKD2Q969F2 451 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 EME1Q96AY2 570 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 EFHD2Q96C19 240 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 MRRFQ96E11 262 aaKnown RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 HEMGNQ9BXL5 484 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 IRF2BPLQ9H1B7 796 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 S1PR5Q9H228 398 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 PSTPIP2Q9H939 334 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 CHORDC1Q9UHD1 332 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 FARP1Q9Y4F1 1045 aaPredicted RBP10.34□□□□□ -0.75
APTX-216ENST00000472896 PCDHA1Q9Y5I3 950 aa10.34□□□□□ -0.75
APTX-216ENST00000472896 MYO10Q9HD67 2058 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 PRR23AA6NEV1 266 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 GOLGA8RI6L899 631 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 NOP56O00567 594 aaKnown RBP10.33□□□□□ -0.76
APTX-216ENST00000472896 SLITRK3O94933 977 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 BMP10O95393 424 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 INHBAP08476 426 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 ARP10275 920 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 THRAP10827 490 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 ATF7P17544 494 aaPredicted RBP10.33□□□□□ -0.76
APTX-216ENST00000472896 CD52P31358 61 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 ENTPD1P49961 510 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 SNRPFP62306 86 aaKnown RBP10.33□□□□□ -0.76
APTX-216ENST00000472896 SLC25A3Q00325 362 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 KCNC4Q03721 635 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 BST1Q10588 318 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 CBLBQ13191 982 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 SEPT6Q14141 434 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 NDUFA5Q16718 116 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 TEX44Q53QW1 395 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 MDH1BQ5I0G3 518 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 TTC39BQ5VTQ0 682 aaPredicted RBP10.33□□□□□ -0.76
APTX-216ENST00000472896 NEPROQ6NW34 567 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 METTL7BQ6UX53 244 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 CAPN12Q6ZSI9 719 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 HM13Q8TCT9 377 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 SLC44A1Q8WWI5 657 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 DLG3Q92796 817 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 CNBD2Q96M20 576 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 SERPINI1Q99574 410 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 APOL5Q9BWW9 433 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 TUFT1Q9NNX1 390 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 MAP3K20Q9NYL2 800 aaKnown RBP10.33□□□□□ -0.76
APTX-216ENST00000472896 EPS15L1Q9UBC2 864 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 GNPTGQ9UJJ9 305 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 PRPF19Q9UMS4 504 aaKnown RBP10.33□□□□□ -0.76
APTX-216ENST00000472896 PLLPQ9Y342 182 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 CDY2AQ9Y6F7 541 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 RIF1Q5UIP0 2472 aaKnown RBP10.33□□□□□ -0.76
APTX-216ENST00000472896 KIAA1671Q9BY89 1806 aa10.33□□□□□ -0.76
APTX-216ENST00000472896 E5RJQ4 531 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 RBP3P10745 1247 aa10.32□□□□□ -0.76
APTX-216ENST00000472896 NMT1P30419 496 aaKnown RBP10.32□□□□□ -0.76
APTX-216ENST00000472896 EPHB1P54762 984 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms