RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PITX1P78337 314 aaPredicted RBP9.48□□□□□ -0.89
SMC4-213ENST00000472282 CREB5Q02930 508 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 AASDHQ4L235 1098 aaPredicted RBP9.48□□□□□ -0.89
SMC4-213ENST00000472282 DCAF6Q58WW2 860 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 SYPL2Q5VXT5 272 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 TAC4Q86UU9 113 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 MCOLN2Q8IZK6 566 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 DEFB106AQ8N104 65 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 ZNF513Q8N8E2 541 aaPredicted RBP9.48□□□□□ -0.89
SMC4-213ENST00000472282 DQX1Q8TE96 717 aaKnown RBP9.48□□□□□ -0.89
SMC4-213ENST00000472282 SLC2A13Q96QE2 648 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 CHP1Q99653 195 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 TRIM62Q9BVG3 475 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 DEF6Q9H4E7 631 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 CD248Q9HCU0 757 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 CD93Q9NPY3 652 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 DNAJC17Q9NVM6 304 aaKnown RBP9.48□□□□□ -0.89
SMC4-213ENST00000472282 MARK1Q9P0L2 795 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 DEC1Q9P2X7 70 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 MBD1Q9UIS9 605 aaPredicted RBP9.48□□□□□ -0.89
SMC4-213ENST00000472282 STRIP2Q9ULQ0 834 aa9.48□□□□□ -0.89
SMC4-213ENST00000472282 A0A087X0T9 212 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 SSU72P8A0A1W2PR75 194 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 BCLAF3A2AJT9 711 aaKnown RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 WASH3PC4AMC7 463 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 MEN1O00255 615 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 IRAK2O43187 625 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 RTN2O75298 545 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 FTLP02792 175 aaPredicted RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 CISD3P0C7P0 127 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 FAM228BP0C875 321 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 GZMAP12544 262 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 GABRG2P18507 467 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 SDHBP21912 280 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 FLT3P36888 993 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 P2RY2P41231 377 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 GSCP56915 257 aaPredicted RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 COG7P83436 770 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 ELF2Q15723 593 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 USP39Q53GS9 565 aaKnown RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 PPM1JQ5JR12 505 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 EOGTQ5NDL2 527 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 GRAMD4Q6IC98 578 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 TRNP1Q6NT89 227 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 KIAA1211LQ6NV74 962 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 PPP1R2P3Q6NXS1 205 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 BEND5Q7L4P6 421 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 ARMCX6Q7L4S7 300 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 EMC1Q8N766 993 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 C12orf50Q8NA57 414 aaPredicted RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 C3orf20Q8ND61 904 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 CCDC26Q8TAB7 109 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 JOSD2Q8TAC2 188 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 HMGB4Q8WW32 186 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 ZNF653Q96CK0 615 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 SERPINB11Q96P15 392 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 SELENOOQ9BVL4 669 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 SLC6A17Q9H1V8 727 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 FAM204AQ9H8W3 233 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 WDR35Q9P2L0 1181 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 LSM7Q9UK45 103 aaKnown RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 CLEC4EQ9ULY5 219 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 HBS1LQ9Y450 684 aaKnown RBP9.47□□□□□ -0.89
SMC4-213ENST00000472282 PCDHGA5Q9Y5G8 931 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 RAD54BQ9Y620 910 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 TMEM131Q92545 1883 aa9.47□□□□□ -0.89
SMC4-213ENST00000472282 SYNJ2BP-COX16A0A087WUM0 186 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 A0A1W2PQF6 199 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 AKR1B10O60218 316 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 RHOBTB1O94844 696 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 TRUB2O95900 331 aaKnown RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 ADRB1P08588 477 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 HOXB2P14652 356 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 RHOQP17081 205 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 ABCB4P21439 1286 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 RRM1P23921 792 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 CORO1AP31146 461 aaKnown RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 NOS2P35228 1153 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 MATKP42679 507 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 PTGER3P43115 390 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 DHPSP49366 369 aaPredicted RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 DGKGP49619 791 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 SULT1E1P49888 294 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 LIMK1P53667 647 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 TBX4P57082 545 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 CDK17Q00537 523 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 GFPT1Q06210 699 aaPredicted RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 TRIP4Q15650 581 aaPredicted RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 SLC18A3Q16572 532 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 GEN1Q17RS7 908 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 ASTE1Q2TB18 679 aaPredicted RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 HSF5Q4G112 596 aaPredicted RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 CCDC122Q5T0U0 273 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 STPG1Q5TH74 334 aa9.46□□□□□ -0.9
SMC4-213ENST00000472282 OTUD1Q5VV17 481 aaPredicted RBP9.46□□□□□ -0.9
SMC4-213ENST00000472282 FYB2Q5VWT5 728 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms