RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 OR12D3Q9UGF7 316 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 ADAMTS1Q9UHI8 967 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 SLCO3A1Q9UIG8 710 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 LUC7L2Q9Y383 392 aaKnown RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.42□□□□□ -0.9
SYN3-211ENST00000472027 OR51B4Q9Y5P0 310 aa9.42□□□□□ -0.9
SYN3-211ENST00000472027 BZW2Q9Y6E2 419 aaKnown RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.42□□□□□ -0.9
SYN3-211ENST00000472027 CACNA1HO95180 2353 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 BCLAF3A2AJT9 711 aaKnown RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 TTC34A8MYJ7 566 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 AP5Z1O43299 807 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 CCP110O43303 1012 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 ATMINO43313 823 aaPredicted RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 SERPING1P05155 500 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 RHOCP08134 193 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 ZNF806P0C7X5 589 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 ACADMP11310 421 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 CD6P30203 668 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 OR1E1P30953 314 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 CASP14P31944 242 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 MPLP40238 635 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 NNMTP40261 264 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 PTGER3P43115 390 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 STK19P49842 368 aaPredicted RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 TPMTP51580 245 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 OGDHQ02218 1023 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 RPL6Q02878 288 aaKnown RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 SULT2A1Q06520 285 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 ARID5BQ14865 1188 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 TDRD12Q587J7 1177 aaKnown RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 PLA2G2CQ5R387 149 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 C9orf64Q5T6V5 341 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 PLEKHA7Q6IQ23 1121 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 SCYL2Q6P3W7 929 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 ARMCX6Q7L4S7 300 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 TFAP2DQ7Z6R9 452 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 SETD3Q86TU7 594 aaPredicted RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 CCDC185Q8N715 623 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 PTPRN2Q92932 1015 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 CNPY3Q9BT09 278 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 ZYG11BQ9C0D3 744 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 MUC3BQ9H195 1237 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 ISCUQ9H1K1 167 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 SMOC1Q9H4F8 434 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 WSB2Q9NYS7 404 aaPredicted RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 USP36Q9P275 1121 aaKnown RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 CNOT8Q9UFF9 292 aaKnown RBP9.41□□□□□ -0.9
SYN3-211ENST00000472027 EML5Q05BV3 1969 aa9.41□□□□□ -0.9
SYN3-211ENST00000472027 A0A0D9SEW6 157 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 TARSL2A2RTX5 802 aaKnown RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 TMEM191CA6NGB0 347 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 FAM72CH0Y354 149 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 SIN3BO75182 1162 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 NDUFS2O75306 463 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 DNTTP04053 509 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 PLEKP08567 350 aaPredicted RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 C7P10643 843 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 OXTRP30559 389 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 ID4P47928 161 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 RPS14P62263 151 aaKnown RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 KRT83P78385 493 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 NRG1Q02297 640 aaPredicted RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 ZNF33AQ06730 810 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 SF3A2Q15428 464 aaKnown RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 ACCSLQ4AC99 568 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 C6orf118Q5T5N4 469 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 FAM72AQ5TYM5 149 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 SPECC1LQ69YQ0 1117 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 FAM72DQ6L9T8 149 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 SLFN11Q7Z7L1 901 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 FAM72BQ86X60 149 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 CACUL1Q86Y37 369 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 C12orf50Q8NA57 414 aaPredicted RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 PIGKQ92643 395 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 NTAN1Q96AB6 310 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 TOE1Q96GM8 510 aaKnown RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 ZNF419Q96HQ0 510 aaPredicted RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 FAM129BQ96TA1 746 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 PSMB7Q99436 277 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 RSPH9Q9H1X1 276 aaPredicted RBP9.4□□□□□ -0.9
SYN3-211ENST00000472027 FBRSQ9HAH7 460 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 VPS45Q9NRW7 570 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 TMEM74BQ9NUR3 256 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 MYO1AQ9UBC5 1043 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 ZNF212Q9UDV6 495 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 VPS28Q9UK41 221 aa9.4□□□□□ -0.9
SYN3-211ENST00000472027 MYO18AQ92614 2054 aaKnown RBP9.4□□□□□ -0.91
SYN3-211ENST00000472027 A0A087X0T9 212 aa9.39□□□□□ -0.91
SYN3-211ENST00000472027 EDDM13A0A1B0GTR0 161 aa9.39□□□□□ -0.91
SYN3-211ENST00000472027 ILVBLA1L0T0 632 aa9.39□□□□□ -0.91
SYN3-211ENST00000472027 PRR5-ARHGAP8B1AHC4 643 aa9.39□□□□□ -0.91
SYN3-211ENST00000472027 GDF9O60383 454 aa9.39□□□□□ -0.91
SYN3-211ENST00000472027 FOXD2O60548 495 aaPredicted RBP9.39□□□□□ -0.91
SYN3-211ENST00000472027 RNASEH1O60930 286 aaKnown RBP9.39□□□□□ -0.91
SYN3-211ENST00000472027 LRIG2O94898 1065 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms