RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 TBC1D30Q9Y2I9 924 aa15.2■□□□□ 0.02
COL9A3-209ENST00000469852 SLC27A6Q9Y2P4 619 aa15.2■□□□□ 0.02
COL9A3-209ENST00000469852 NYNRINQ9P2P1 1898 aaKnown RBP15.2■□□□□ 0.02
COL9A3-209ENST00000469852 MUC22E2RYF6 1773 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-209ENST00000469852 A0A0D9SEW6 157 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 CCDC66A2RUB6 948 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 WASH4PA8MWX3 477 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 CHRM1P11229 460 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-209ENST00000469852 OR1E1P30953 314 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 HTR7P34969 479 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ARL4AP40617 200 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 HCAR3P49019 387 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ADCY2Q08462 1091 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF177Q13360 481 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ANKRD20A8PQ5CZ79 823 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF569Q5MCW4 686 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ADIPOR2Q86V24 386 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 PQLC3Q8N755 202 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL9A3-209ENST00000469852 TRIM58Q8NG06 486 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 FAF2Q96CS3 445 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 MSANTD3Q96H12 275 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ALS2CR12Q96Q35 445 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF670Q9BS34 389 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 TLR10Q9BXR5 811 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 TBC1D17Q9HA65 648 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 LTB4R2Q9NPC1 389 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ZDHHC4Q9NPG8 344 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 RBM12Q9NTZ6 932 aaKnown RBP15.19■□□□□ 0.02
COL9A3-209ENST00000469852 OR51B4Q9Y5P0 310 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 ATG2BQ96BY7 2078 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 NUP205Q92621 2012 aa15.19■□□□□ 0.02
COL9A3-209ENST00000469852 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 K7EQS6 105 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 MAN2B1O00754 1011 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 FGF10O15520 208 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 DAPK3O43293 454 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 RHOCP08134 193 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 PYGMP11217 842 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 PABPC1P11940 636 aaKnown RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 KRT10P13645 584 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 CDKN2BP42772 138 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 AMPD2Q01433 879 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 FZD5Q13467 585 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 TAZQ16635 292 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 HS1BP3Q53T59 392 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 PITRM1Q5JRX3 1037 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 EMC10Q5UCC4 262 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 RNF219Q5W0B1 726 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF852Q6ZMS4 543 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 SPOCD1Q6ZMY3 1216 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 ALYREFQ86V81 257 aaKnown RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 OR7D4Q8NG98 312 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 SORCS1Q8WY21 1168 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 CELF6Q96J87 481 aaKnown RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 RNF157Q96PX1 679 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 PSMB7Q99436 277 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 CATSPERBQ9H7T0 1116 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-209ENST00000469852 ZKSCAN5Q9Y2L8 839 aa15.18■□□□□ 0.02
COL9A3-209ENST00000469852 PIEZO1Q92508 2521 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 hCG_1818297A0A087WSY0 165 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 KANSL1LA0AUZ9 987 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 TBC1D3BA6NDS4 549 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 MIF4GDA9UHW6 222 aaKnown RBP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 ENC1O14682 589 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 FANCGO15287 622 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 ZRANB2O95218 330 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 APODP05090 189 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 GLDCP23378 1020 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 ACVRL1P37023 503 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 GRIA2P42262 883 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 CTSOP43234 321 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 MAPKAPK2P49137 400 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF135P52742 658 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 SEC13P55735 322 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 RWDD2BP57060 319 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 CCINQ13939 588 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 UBXN2BQ14CS0 331 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 PLEKHG6Q3KR16 790 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 NCBP2-AS2Q69YL0 99 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 CWF19L1Q69YN2 538 aaKnown RBP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 SETD3Q86TU7 594 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 MAP7D3Q8IWC1 876 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 ARHGAP12Q8IWW6 846 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 CCDC33Q8N5R6 958 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 EXD1Q8NHP7 514 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 TRIM44Q96DX7 344 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 SHDQ96IW2 340 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 FEM1AQ9BSK4 669 aa15.17■□□□□ 0.02
COL9A3-209ENST00000469852 KIAA1522Q9P206 1035 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL9A3-209ENST00000469852 ILVBLA1L0T0 632 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 GOLGA6L9A6NEM1 432 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 TMEM221A6NGB7 291 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 M0R296 226 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 MFSD11O43934 449 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms