RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 STK19P49842 368 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 C19orf57Q0VDD7 668 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 STILQ15468 1287 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 SLC45A4Q5BKX6 768 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 ANKRD40Q6AI12 368 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 NAPEPLDQ6IQ20 393 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 LRRC69Q6ZNQ3 347 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 TAC4Q86UU9 113 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 SPATS2Q86XZ4 545 aaKnown RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 CCDC117Q8IWD4 279 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 OXR1Q8N573 874 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 SNIP1Q8TAD8 396 aaKnown RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 RPL10LQ96L21 214 aaKnown RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 TSG101Q99816 390 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 ARHGAP20Q9P2F6 1191 aa13.52□□□□□ -0.25
PTPN7-207ENST00000468385 TPX2Q9ULW0 747 aaKnown RBP13.52□□□□□ -0.25
PTPN7-207ENST00000468385 NYNRINQ9P2P1 1898 aaKnown RBP13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3DA0A087WVF3 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3IA0A087WXS9 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3EA0A087X179 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3KA0A087X1G2 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3FA6NER0 549 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3LB9A6J9 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 IL1BP01584 269 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3HP0C7X1 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 VAV1P15498 845 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TACR2P21452 398 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 FMO5P49326 533 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 METAP1P53582 386 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 ILKQ13418 452 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 PNOCQ13519 176 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 ELAVL3Q14576 367 aaKnown RBP13.51□□□□□ -0.25
PTPN7-207ENST00000468385 SYPL2Q5VXT5 272 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 RNF219Q5W0B1 726 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-207ENST00000468385 RAP1GAP2Q684P5 730 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3GQ6DHY5 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3CQ6IPX1 549 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D3Q8IZP1 549 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-207ENST00000468385 LGI2Q8N0V4 545 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 MFSD2AQ8NA29 543 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 ARMCX3Q9UH62 379 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-207ENST00000468385 CEP83Q9Y592 693 aa13.51□□□□□ -0.25
PTPN7-207ENST00000468385 PMM2O15305 246 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 RRP8O43159 456 aaKnown RBP13.5□□□□□ -0.25
PTPN7-207ENST00000468385 CKMT2P17540 419 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 GPD2P43304 727 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 NUMBP49757 651 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-207ENST00000468385 BEND5Q7L4P6 421 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 CHSY1Q86X52 802 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 CACTIN-AS1Q8N1I8 211 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 LMO3Q8TAP4 145 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 FRS2Q8WU20 508 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 FAM149B1Q96BN6 582 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 NT5C1BQ96P26 610 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 FCRL3Q96P31 734 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-207ENST00000468385 RMND1Q9NWS8 449 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 CYTH4Q9UIA0 394 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 SARDHQ9UL12 918 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 SHROOM3Q8TF72 1996 aa13.5□□□□□ -0.25
PTPN7-207ENST00000468385 MYLKQ15746 1914 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 PLRG1O43660 514 aaKnown RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 BRINP1O60477 761 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 RTN2O75298 545 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 IGLV3-25P01717 112 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 APOEP02649 317 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 PDGFRAP16234 1089 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 ACP1P24666 158 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 MAT2AP31153 395 aaKnown RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 INSM1Q01101 510 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 LRRC63Q05C16 580 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 EIF4EBP2Q13542 120 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 SLC12A1Q13621 1099 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 PROX2Q3B8N5 592 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 ZC3H12AQ5D1E8 599 aaKnown RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 RRAGAQ7L523 313 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 PRPF39Q86UA1 669 aaKnown RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 IQCHQ86VS3 1027 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 CIR1Q86X95 450 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 LSM14AQ8ND56 463 aaKnown RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 BAP1Q92560 729 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 FGF11Q92914 225 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 SPAG5Q96R06 1193 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 PRMT1Q99873 361 aaKnown RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 SCAND2PQ9GZW5 306 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 KDM4CQ9H3R0 1056 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 METTL14Q9HCE5 456 aaKnown RBP13.49□□□□□ -0.25
PTPN7-207ENST00000468385 TJP2Q9UDY2 1190 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 CLCA2Q9UQC9 943 aa13.49□□□□□ -0.25
PTPN7-207ENST00000468385 TRIM38O00635 465 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 CAPN9O14815 690 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 SLC7A4O43246 635 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 SART1O43290 800 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms