RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SYNJ2BP-COX16A0A087WUM0 186 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 TCRBV21S2A2A0A5A6 115 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 MDM4O15151 490 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 PROSCO94903 275 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 CYBBP04839 570 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 HMBSP08397 361 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 IRF1P10914 325 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 CSRP1P21291 193 aaKnown RBP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 CORO1AP31146 461 aaKnown RBP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 PTGER3P43115 390 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ZNF135P52742 658 aaPredicted RBP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ZNF252P-AS1Q0IIN9 211 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 BYSLQ13895 437 aaKnown RBP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ANO4Q32M45 955 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 PREPLQ4J6C6 727 aaPredicted RBP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 TRIM61Q5EBN2 209 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 SPDYCQ5MJ68 293 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ARMCX6Q7L4S7 300 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 TRMT11Q7Z4G4 463 aaKnown RBP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 DNAAF5Q86Y56 855 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 TMEM25Q86YD3 366 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 SYT12Q8IV01 421 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 PGBD3Q8N328 593 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ZNF513Q8N8E2 541 aaPredicted RBP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ADAM32Q8TC27 787 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 SLC39A13Q96H72 371 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ALS2CR12Q96Q35 445 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 COX16Q9P0S2 106 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 PPP2R2CQ9Y2T4 447 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.01■□□□□ 0.47
CPSF4-209ENST00000465132 ZFHX4Q86UP3 3567 aa18.01■□□□□ 0.47
CPSF4-209ENST00000465132 KCNU1A8MYU2 1149 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 MSI1O43347 362 aaKnown RBP18■□□□□ 0.47
CPSF4-209ENST00000465132 KRT7P08729 469 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 CEACAM1P13688 526 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 LMAN2Q12907 356 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 BOLA3Q53S33 107 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 ODF2Q5BJF6 829 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 EFHC2Q5JST6 749 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 ADGRF1Q5T601 910 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 C11orf63Q6NUN7 778 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 SCYL2Q6P3W7 929 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 LRRC31Q6UY01 552 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 BNIPLQ7Z465 357 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 SLFN11Q7Z7L1 901 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 CCDC117Q8IWD4 279 aaPredicted RBP18■□□□□ 0.47
CPSF4-209ENST00000465132 ZNF557Q8N988 423 aaPredicted RBP18■□□□□ 0.47
CPSF4-209ENST00000465132 TERB1Q8NA31 727 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 NTAN1Q96AB6 310 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 FCRL2Q96LA5 508 aaPredicted RBP18■□□□□ 0.47
CPSF4-209ENST00000465132 C1orf74Q96LT6 269 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 HAPLN3Q96S86 360 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 PIGVQ9NUD9 493 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 TMEM74BQ9NUR3 256 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 DONSONQ9NYP3 566 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 HCN2Q9UL51 889 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 WASF3Q9UPY6 502 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 REXO2Q9Y3B8 237 aaKnown RBP18■□□□□ 0.47
CPSF4-209ENST00000465132 MYOFQ9NZM1 2061 aa18■□□□□ 0.47
CPSF4-209ENST00000465132 TRIM24O15164 1050 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 ACSL4O60488 711 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 GREM1O60565 184 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 GJB6O95452 261 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 PROS1P07225 676 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 SSR1P43307 286 aaKnown RBP17.99■□□□□ 0.47
CPSF4-209ENST00000465132 EIF4EBP2Q13542 120 aaPredicted RBP17.99■□□□□ 0.47
CPSF4-209ENST00000465132 MESDQ14696 234 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 C15orf59Q2T9L4 293 aaPredicted RBP17.99■□□□□ 0.47
CPSF4-209ENST00000465132 UAP1L1Q3KQV9 507 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 ZC3H12AQ5D1E8 599 aaKnown RBP17.99■□□□□ 0.47
CPSF4-209ENST00000465132 RABGAP1LQ5R372 815 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 LYSMD4Q5XG99 296 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 NUDT18Q6ZVK8 323 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 DAAM2Q86T65 1068 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 DENND1CQ8IV53 801 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 CPXM2Q8N436 756 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 KIAA1524Q8TCG1 905 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 TKTL2Q9H0I9 626 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 RETREG1Q9H6L5 497 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 OSGEPQ9NPF4 335 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 ARHGEF38Q9NXL2 777 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 STOML2Q9UJZ1 356 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 STARD13Q9Y3M8 1113 aa17.99■□□□□ 0.47
CPSF4-209ENST00000465132 SPOPO43791 374 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 GABRG2P18507 467 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 HTR7P34969 479 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 ADRA1BP35368 520 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 DPP6P42658 865 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 HDAC4P56524 1084 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 FOXC1Q12948 553 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 TTC39BQ5VTQ0 682 aaPredicted RBP17.98■□□□□ 0.47
CPSF4-209ENST00000465132 PEAR1Q5VY43 1037 aaPredicted RBP17.98■□□□□ 0.47
CPSF4-209ENST00000465132 NUSAP1Q9BXS6 441 aaKnown RBP17.98■□□□□ 0.47
CPSF4-209ENST00000465132 PILRBQ9UKJ0 227 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 AGO1Q9UL18 857 aaKnown RBP17.98■□□□□ 0.47
CPSF4-209ENST00000465132 GUCA1BQ9UMX6 200 aa17.98■□□□□ 0.47
CPSF4-209ENST00000465132 LAMA1P25391 3075 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 A0A1W2PQF6 199 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 F5H5T6 163 aa17.97■□□□□ 0.47
CPSF4-209ENST00000465132 MOCS2O96007 188 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms