RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 A8MV72 311 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 H3BMQ9 156 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 STMND1H3BQB6 276 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 I3L4J1 428 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 M0QX08 132 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MUSKO15146 869 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DENRO43583 198 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SCO2O43819 266 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NUAK1O60285 661 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 BMP15O95972 392 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 HLA-DRAP01903 254 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 KITP10721 976 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 HSPD1P10809 573 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 FGFR1P11362 822 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ALAS1P13196 640 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EN2P19622 333 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 BTF3P20290 206 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 POLR2BP30876 1174 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 IL13P35225 146 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 HTR2BP41595 481 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 GPD2P43304 727 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 KCNJ1P48048 391 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ST13P50502 369 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF157P51786 506 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NPEPPSP55786 919 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 HSD17B7P56937 341 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PTENP60484 403 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 GPLD1P80108 840 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SHC2P98077 582 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 XIAPP98170 497 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CDK16Q00536 496 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CD83Q01151 205 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SSRP1Q08945 709 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DBPQ10586 325 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CCNIQ14094 377 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CTTNQ14247 550 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PDK4Q16654 411 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ARHGAP44Q17R89 818 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 KCNT1Q5JUK3 1230 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 METTL24Q5JXM2 366 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 RARS2Q5T160 578 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 AGAP7PQ5VUJ5 663 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 IER5Q5VY09 327 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ANKRD40Q6AI12 368 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ANKRD26P1Q6NSI1 321 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NECAB2Q7Z6G3 386 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TPH2Q8IWU9 490 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 THNSL1Q8IYQ7 743 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 FBXL6Q8N531 539 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 VGLL2Q8N8G2 317 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 KIAA1958Q8N8K9 716 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 AGBL3Q8NEM8 1001 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 JPH3Q8WXH2 748 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SEC14L1Q92503 715 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 OXNAD1Q96HP4 312 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CEP170P1Q96L14 293 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 COG8Q96MW5 612 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 POP1Q99575 1024 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 LPIN3Q9BQK8 851 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 BTBD2Q9BX70 525 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 BBS2Q9BXC9 721 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EMILIN2Q9BXX0 1053 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TSPAN10Q9H1Z9 355 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TRABDQ9H4I3 376 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 RPF2Q9H7B2 306 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 IFT22Q9H7X7 185 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EPB41L4AQ9HCS5 686 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TIGARQ9NQ88 270 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TCF7L2Q9NQB0 619 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 CYP26B1Q9NR63 512 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DENND2AQ9ULE3 1009 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PRR12Q9ULL5 1215 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 TRAF6Q9Y4K3 522 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 DGKBQ9Y6T7 804 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 PMF1-BGLAPU3KQ54 211 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MAP3K15Q6ZN16 1313 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MYO3BQ8WXR4 1341 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 FAM237BA0A1B0GVD1 139 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RAB19A4D1S5 217 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 OR5K4A6NMS3 321 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 FOXN3O00409 490 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TOR1BO14657 336 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 WIPF1O43516 503 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SERPINI2O75830 405 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CCNKO75909 580 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 DNAJB5O75953 348 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 OR7A10O76100 309 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 DLGAP3O95886 979 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TTLL1O95922 423 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SERPINB2P05120 415 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CALB1P05937 261 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PGRP06401 933 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SNRPAP09012 282 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CLEC2LP0C7M8 214 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PLCG1P19174 1290 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RFX1P22670 979 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 IDUAP35475 653 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 OR3A3P47888 321 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RAD23AP54725 363 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms