RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 NAPEPLDQ6IQ20 393 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 RGS9BPQ6ZS82 235 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 PIGWQ7Z7B1 504 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 MPP5Q8N3R9 675 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 PDZD8Q8NEN9 1154 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 FBXO22Q8NEZ5 403 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 DEPDC1BQ8WUY9 529 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 OVCA2Q8WZ82 227 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 DPF3Q92784 378 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 B3GALT6Q96L58 329 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 PLCD4Q9BRC7 762 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 KIF9Q9HAQ2 790 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 HSFX1Q9UBD0 423 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 NYNRINQ9P2P1 1898 aaKnown RBP16.05■□□□□ 0.16
SNX13-204ENST00000444712 DNAH12Q6ZR08 3092 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 MAGEB16A2A368 324 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 WDR27A2RRH5 827 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 MGAT1P26572 445 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 NPY2RP49146 381 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 SESN2P58004 480 aaPredicted RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 EFEMP1Q12805 493 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 TAF10Q12962 218 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 ZBTB17Q13105 803 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 PSMD5Q16401 504 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 KCTD11Q693B1 232 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 MARK2Q7KZI7 788 aaKnown RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 PRPF39Q86UA1 669 aaKnown RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 ARHGAP12Q8IWW6 846 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 TTC9BQ8N6N2 239 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 BANPQ8N9N5 519 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 APOPT1Q96IL0 206 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 CELF6Q96J87 481 aaKnown RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 AGAP3Q96P47 875 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 UBE2OQ9C0C9 1292 aaKnown RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 CASS4Q9NQ75 786 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 MARCH2Q9P0N8 246 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 NUDT5Q9UKK9 219 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 TBX21Q9UL17 535 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 CDY1Q9Y6F8 540 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 MATN3O15232 486 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 ANXA9O76027 345 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 EFEMP2O95967 443 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 CCNB1P14635 433 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 RHOQP17081 205 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 NFKB1P19838 968 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 RPA3P35244 121 aaPredicted RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 NDST2P52849 883 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 WDR4P57081 412 aaKnown RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 SLC18A2Q05940 514 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 DUSP4Q13115 394 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 DNAJC3Q13217 504 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 FRG1Q14331 258 aaKnown RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 PDK4Q16654 411 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 C10orf120Q5SQS8 335 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 AFMIDQ63HM1 303 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 C6orf89Q6UWU4 347 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 KLHDC8BQ8IXV7 354 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 FATE1Q969F0 183 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
SNX13-204ENST00000444712 ZYG11BQ9C0D3 744 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 PLAC1Q9HBJ0 212 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 MLXIPLQ9NP71 852 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 HCSTQ9UBK5 93 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 SLC27A5Q9Y2P5 690 aa16.04■□□□□ 0.16
SNX13-204ENST00000444712 SLC38A8A6NNN8 435 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 F5H423 210 aaPredicted RBP16.03■□□□□ 0.16
SNX13-204ENST00000444712 CACNG3O60359 315 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 LPXNO60711 386 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 JCHAINP01591 159 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 ZDHHC11BP0C7U3 371 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 CD68P34810 354 aaPredicted RBP16.03■□□□□ 0.16
SNX13-204ENST00000444712 FAM182AQ5T1J6 154 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 PIK3R6Q5UE93 754 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 KIAA1841Q6NSI8 718 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 RSPO2Q6UXX9 243 aaPredicted RBP16.03■□□□□ 0.16
SNX13-204ENST00000444712 RNF168Q8IYW5 571 aaPredicted RBP16.03■□□□□ 0.16
SNX13-204ENST00000444712 DNAAF3Q8N9W5 541 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 ARNTL2Q8WYA1 636 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 IGSF21Q96ID5 467 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 IL12RB2Q99665 862 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 CWH43Q9H720 699 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 TMEM248Q9NWD8 314 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 MKS1Q9NXB0 559 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 VANGL2Q9ULK5 521 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 HBS1LQ9Y450 684 aaKnown RBP16.03■□□□□ 0.16
SNX13-204ENST00000444712 CENPFP49454 3210 aa16.03■□□□□ 0.16
SNX13-204ENST00000444712 ABHD14A-ACY1A0A1B0GW23 586 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 TRIM49D1C9J1S8 452 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 EFCAB14O75071 495 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 NEBLO76041 1014 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 UPP2O95045 317 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 VNN2O95498 520 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 IGLV3-27P01718 113 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 ALADP13716 330 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 MNX1P50219 401 aaPredicted RBP16.02■□□□□ 0.16
SNX13-204ENST00000444712 CRYMQ14894 314 aa16.02■□□□□ 0.16
SNX13-204ENST00000444712 MS4A13Q5J8X5 152 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms