RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CCDC6Q16204 474 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 CSRP2Q16527 193 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 HGSNATQ68CP4 663 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 LPCAT2Q7L5N7 544 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 METTL3Q86U44 580 aaKnown RBP24.33■■□□□ 1.49
VARS-217ENST00000440048 TMEFF1Q8IYR6 380 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 KDM1BQ8NB78 822 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 RNF214Q8ND24 703 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 ALG14Q96F25 216 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 SIPA1Q96FS4 1042 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 MTG2Q9H4K7 406 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 PRSS16Q9NQE7 514 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 TBC1D30Q9Y2I9 924 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 LAMA1P25391 3075 aa24.33■■□□□ 1.48
VARS-217ENST00000440048 TNRC6BQ9UPQ9 1833 aaKnown RBP24.33■■□□□ 1.48
VARS-217ENST00000440048 ITIH6Q6UXX5 1313 aa24.33■■□□□ 1.48
VARS-217ENST00000440048 ANKRD62A6NC57 917 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 CCP110O43303 1012 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 SRGAP2O75044 1071 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 FTLP02792 175 aaPredicted RBP24.32■■□□□ 1.48
VARS-217ENST00000440048 GYPCP04921 128 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 DHPSP49366 369 aaPredicted RBP24.32■■□□□ 1.48
VARS-217ENST00000440048 ZNF143P52747 638 aaPredicted RBP24.32■■□□□ 1.48
VARS-217ENST00000440048 CREB5Q02930 508 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 ARL13BQ3SXY8 428 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 DCUN1D2Q6PH85 259 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 SLC36A4Q6YBV0 504 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 PRCCQ92733 491 aaPredicted RBP24.32■■□□□ 1.48
VARS-217ENST00000440048 RMDN1Q96DB5 314 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 PPP1R9BQ96SB3 815 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 FEM1AQ9BSK4 669 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 ITM2CQ9NQX7 267 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 MPP6Q9NZW5 540 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 USP36Q9P275 1121 aaKnown RBP24.32■■□□□ 1.48
VARS-217ENST00000440048 SLCO3A1Q9UIG8 710 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 LUC7L2Q9Y383 392 aaKnown RBP24.32■■□□□ 1.48
VARS-217ENST00000440048 OR51B4Q9Y5P0 310 aa24.32■■□□□ 1.48
VARS-217ENST00000440048 BCLAF3A2AJT9 711 aaKnown RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 ATMINO43313 823 aaPredicted RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 CBFA2T2O43439 604 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 RTN2O75298 545 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 MPLP40238 635 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 SULT2A1Q06520 285 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 MAMLD1Q13495 774 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 HNRNPA1L2Q32P51 320 aaKnown RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 TDRD12Q587J7 1177 aaKnown RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 PLA2G2CQ5R387 149 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 RNF219Q5W0B1 726 aaPredicted RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 PLEKHA7Q6IQ23 1121 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 CACUL1Q86Y37 369 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 CCDC185Q8N715 623 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 RPL10LQ96L21 214 aaKnown RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 FBRSQ9HAH7 460 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 PARVAQ9NVD7 372 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 DLL3Q9NYJ7 618 aa24.31■■□□□ 1.48
VARS-217ENST00000440048 BZW2Q9Y6E2 419 aaKnown RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.31■■□□□ 1.48
VARS-217ENST00000440048 TTC34A8MYJ7 566 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 RHOCP08134 193 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 STK19P49842 368 aaPredicted RBP24.3■■□□□ 1.48
VARS-217ENST00000440048 OGDHQ02218 1023 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 RPL6Q02878 288 aaKnown RBP24.3■■□□□ 1.48
VARS-217ENST00000440048 ARID5BQ14865 1188 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 SPDYCQ5MJ68 293 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 PRR23CQ6ZRP0 262 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 TFAP2DQ7Z6R9 452 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 CNPY3Q9BT09 278 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 MAGEB5Q9BZ81 275 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 OSBPL2Q9H1P3 480 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 SMOC1Q9H4F8 434 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 OR12D3Q9UGF7 316 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 VPS28Q9UK41 221 aa24.3■■□□□ 1.48
VARS-217ENST00000440048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.3■■□□□ 1.48
VARS-217ENST00000440048 AP5Z1O43299 807 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 SIN3BO75182 1162 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 SERPING1P05155 500 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 ZNF806P0C7X5 589 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 C7P10643 843 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 ACADMP11310 421 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 CASP14P31944 242 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 PTGER3P43115 390 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 TPMTP51580 245 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 NRG1Q02297 640 aaPredicted RBP24.29■■□□□ 1.48
VARS-217ENST00000440048 RSPO4Q2I0M5 234 aaPredicted RBP24.29■■□□□ 1.48
VARS-217ENST00000440048 ARMCX6Q7L4S7 300 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 CYP2U1Q7Z449 544 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 DEFB119Q8N690 84 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 NTAN1Q96AB6 310 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 ZYG11BQ9C0D3 744 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 MUC3BQ9H195 1237 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 VPS45Q9NRW7 570 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 PPARGC1AQ9UBK2 798 aaKnown RBP24.29■■□□□ 1.48
VARS-217ENST00000440048 ZNF212Q9UDV6 495 aa24.29■■□□□ 1.48
VARS-217ENST00000440048 NYNRINQ9P2P1 1898 aaKnown RBP24.28■■□□□ 1.48
VARS-217ENST00000440048 SPTBN2O15020 2390 aa24.28■■□□□ 1.48
VARS-217ENST00000440048 PLEKP08567 350 aaPredicted RBP24.28■■□□□ 1.48
VARS-217ENST00000440048 CD6P30203 668 aa24.28■■□□□ 1.48
VARS-217ENST00000440048 RPS14P62263 151 aaKnown RBP24.28■■□□□ 1.48
VARS-217ENST00000440048 SF3A2Q15428 464 aaKnown RBP24.28■■□□□ 1.48
VARS-217ENST00000440048 C9orf64Q5T6V5 341 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms