RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 CCDC26Q8TAB7 109 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 SLC35B2Q8TB61 432 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ZSCAN18Q8TBC5 510 aaPredicted RBP10.28□□□□□ -0.76
CBX5-202ENST00000439541 MAIP1Q8WWC4 291 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 CASKIN2Q8WXE0 1202 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 FGF13Q92913 245 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ARL8AQ96BM9 186 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 RSPRY1Q96DX4 576 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ATP6V1G3Q96LB4 118 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 C1orf74Q96LT6 269 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 TMEM121Q9BTD3 319 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 LRRC19Q9H756 370 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 LMCD1Q9NZU5 365 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 SH3BP1Q9Y3L3 701 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ZFP37Q9Y6Q3 630 aaPredicted RBP10.28□□□□□ -0.76
CBX5-202ENST00000439541 PRUNE2Q8WUY3 3088 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 IGLV3-10A0A075B6K4 115 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 NDUFAB1O14561 156 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ZNF197O14709 1029 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 MCF2LO15068 1137 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ETS1P14921 441 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 NR1D1P20393 614 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 DDX6P26196 483 aaKnown RBP eCLIP10.28□□□□□ -0.76
CBX5-202ENST00000439541 PTGIRP43119 386 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 HCAR3P49019 387 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 FNTAP49354 379 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 VPS41P49754 854 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 DR1Q01658 176 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 NRG1Q02297 640 aaPredicted RBP10.28□□□□□ -0.76
CBX5-202ENST00000439541 USP4Q13107 963 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 BYSLQ13895 437 aaKnown RBP10.28□□□□□ -0.76
CBX5-202ENST00000439541 PAFAH1B3Q15102 231 aaKnown RBP10.28□□□□□ -0.76
CBX5-202ENST00000439541 TRIP13Q15645 432 aaPredicted RBP10.28□□□□□ -0.76
CBX5-202ENST00000439541 CCNG2Q16589 344 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ARHGAP36Q6ZRI8 547 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 NLRP14Q86W24 1093 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 JAMLQ86YT9 394 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 RTL3Q8N8U3 475 aaKnown RBP10.28□□□□□ -0.76
CBX5-202ENST00000439541 MYLIPQ8WY64 445 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 OLFM3Q96PB7 478 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 LRRC3BQ96PB8 259 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 LGMNQ99538 433 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ZYG11BQ9C0D3 744 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 KLC2Q9H0B6 622 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 S1PR5Q9H228 398 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 ADAM7Q9H2U9 754 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 TDP1Q9NUW8 608 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 GGA2Q9UJY4 613 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 FAM169AQ9Y6X4 670 aa10.28□□□□□ -0.76
CBX5-202ENST00000439541 H3BQ06 376 aaPredicted RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 H7C0C1 242 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 FGF10O15520 208 aaPredicted RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 KIAA0754O94854 1291 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 KRT14P02533 472 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 MYZAPP0CAP1 466 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 ZSCAN5DPP0CG00 497 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 RBP3P10745 1247 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 VAV1P15498 845 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 SP100P23497 879 aaPredicted RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 VIPR2P41587 438 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 ATP5OP48047 213 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 HLTFQ14527 1009 aaKnown RBP eCLIP10.27□□□□□ -0.77
CBX5-202ENST00000439541 TRADDQ15628 312 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 CCDC85BQ15834 202 aaPredicted RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 ZNF77Q15935 545 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 FAM78AQ5JUQ0 283 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 SPDYCQ5MJ68 293 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 ADGRF1Q5T601 910 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 ARHGAP12Q8IWW6 846 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 OR52K2Q8NGK3 314 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 TRIM31Q9BZY9 425 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 EPN3Q9H201 632 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 NOL6Q9H6R4 1146 aaKnown RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 ZNF212Q9UDV6 495 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 LSM7Q9UK45 103 aaKnown RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 ZNF148Q9UQR1 794 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
CBX5-202ENST00000439541 NUP210Q8TEM1 1887 aaPredicted RBP10.27□□□□□ -0.77
CBX5-202ENST00000439541 SGK1O00141 431 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 DFFAO00273 331 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 ECEL1O95672 775 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 FAM153BP0C7A2 387 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 ZFXP17010 805 aaPredicted RBP10.26□□□□□ -0.77
CBX5-202ENST00000439541 RHOQP17081 205 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 PFKLP17858 780 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 RBL1P28749 1068 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 ZNF135P52742 658 aaPredicted RBP10.26□□□□□ -0.77
CBX5-202ENST00000439541 FAM153CQ494X1 144 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 TPGS1Q6ZTW0 290 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 YTHDF3Q7Z739 585 aaKnown RBP10.26□□□□□ -0.77
CBX5-202ENST00000439541 TAB3Q8N5C8 712 aaPredicted RBP10.26□□□□□ -0.77
CBX5-202ENST00000439541 FAM71DQ8N9W8 422 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 MSLNLQ96KJ4 702 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 QKIQ96PU8 341 aaKnown RBP eCLIP10.26□□□□□ -0.77
CBX5-202ENST00000439541 MYADMQ96S97 322 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 GAS2L1Q99501 681 aaPredicted RBP10.26□□□□□ -0.77
CBX5-202ENST00000439541 CEP41Q9BYV8 373 aa10.26□□□□□ -0.77
CBX5-202ENST00000439541 DPH5Q9H2P9 285 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms