RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NOL6Q9H6R4 1146 aaKnown RBP23.61■■□□□ 1.37
CPSF4-204ENST00000436336 BRWD1Q9NSI6 2320 aa23.61■■□□□ 1.37
CPSF4-204ENST00000436336 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.6■■□□□ 1.37
CPSF4-204ENST00000436336 SGK1O00141 431 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 CYBBP04839 570 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 GBP2P32456 591 aaPredicted RBP23.6■■□□□ 1.37
CPSF4-204ENST00000436336 GARSP41250 739 aaKnown RBP23.6■■□□□ 1.37
CPSF4-204ENST00000436336 TERF1P54274 439 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 YBEYP58557 167 aaPredicted RBP23.6■■□□□ 1.37
CPSF4-204ENST00000436336 ZNF177Q13360 481 aaPredicted RBP23.6■■□□□ 1.37
CPSF4-204ENST00000436336 PRKD1Q15139 912 aaPredicted RBP23.6■■□□□ 1.37
CPSF4-204ENST00000436336 C6orf118Q5T5N4 469 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 LRRC49Q8IUZ0 686 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 DDI1Q8WTU0 396 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 LRRC3BQ96PB8 259 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 C10orf88Q9H8K7 445 aa23.6■■□□□ 1.37
CPSF4-204ENST00000436336 USP15Q9Y4E8 981 aaPredicted RBP23.6■■□□□ 1.37
CPSF4-204ENST00000436336 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 TARSL2A2RTX5 802 aaKnown RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 DFFAO00273 331 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 RAMP2O60895 175 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 HEXIM1O94992 359 aaKnown RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 FCARP24071 287 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 RBL1P28749 1068 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 SLC7A5Q01650 507 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 ZNF33AQ06730 810 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 PPIDQ08752 370 aaKnown RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 PPP1R7Q15435 360 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 HEATR6Q6AI08 1181 aaKnown RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 SETD3Q86TU7 594 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 CCNYQ8ND76 341 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 LGMNQ99538 433 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 ZFP14Q9HCL3 533 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 DMGDHQ9UI17 866 aaKnown RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 TBC1D30Q9Y2I9 924 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 HEPACAM2A8MVW5 462 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 LUC7L3O95232 432 aaKnown RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 LAMP2P13473 410 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 FOSL2P15408 326 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 AP1B1Q10567 949 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 CCDC85BQ15834 202 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 PARP15Q460N3 678 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 TPGS1Q6ZTW0 290 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 B4GALNT4Q76KP1 1039 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 GPR161Q8N6U8 529 aaKnown RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 OSCP1Q8WVF1 389 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 GUCD1Q96NT3 240 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 FERMT1Q9BQL6 677 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 RAB17Q9H0T7 212 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 UBE2ZQ9H832 354 aaPredicted RBP23.59■■□□□ 1.37
CPSF4-204ENST00000436336 ANKZF1Q9H8Y5 726 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 USP29Q9HBJ7 922 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 NEU2Q9Y3R4 380 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 WNT6Q9Y6F9 365 aa23.59■■□□□ 1.37
CPSF4-204ENST00000436336 ARHGAP42A6NI28 874 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 RASA4BC9J798 803 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 H3BQ06 376 aaPredicted RBP23.58■■□□□ 1.37
CPSF4-204ENST00000436336 KCNN4O15554 427 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 RASA4O43374 803 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 GDF10P55107 478 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 PTK6Q13882 451 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 NAA30Q147X3 362 aaPredicted RBP23.58■■□□□ 1.37
CPSF4-204ENST00000436336 POLD3Q15054 466 aaPredicted RBP23.58■■□□□ 1.37
CPSF4-204ENST00000436336 HABP4Q5JVS0 413 aaKnown RBP23.58■■□□□ 1.37
CPSF4-204ENST00000436336 ADGRG2Q8IZP9 1017 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 ATPAF2Q8N5M1 289 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 DEFB123Q8N688 67 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 LRRN4Q8WUT4 740 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 HTR3CQ8WXA8 447 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 IRF7Q92985 503 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 TSGA13Q96PP4 275 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 TRIM51Q9BSJ1 452 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 MAGEH1Q9H213 219 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 LINC00597Q9H2U6 94 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 SPHK2Q9NRA0 654 aa23.58■■□□□ 1.37
CPSF4-204ENST00000436336 DUS2Q9NX74 493 aaKnown RBP23.58■■□□□ 1.37
CPSF4-204ENST00000436336 UTP11Q9Y3A2 253 aaKnown RBP23.58■■□□□ 1.37
CPSF4-204ENST00000436336 ILVBLA1L0T0 632 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 H0Y626 953 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 KRT14P02533 472 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 RHOCP08134 193 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 HOXD9P28356 352 aaPredicted RBP23.57■■□□□ 1.36
CPSF4-204ENST00000436336 PAPOLAP51003 745 aaKnown RBP23.57■■□□□ 1.36
CPSF4-204ENST00000436336 FYB2Q5VWT5 728 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 RNF43Q68DV7 783 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 TANGO2Q6ICL3 276 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 CARNMT1Q8N4J0 409 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 CCDC89Q8N998 374 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 FAM71DQ8N9W8 422 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 CCHCR1Q8TD31 782 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 RTP4Q96DX8 246 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 ERP44Q9BS26 406 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 EPC1Q9H2F5 836 aa23.57■■□□□ 1.36
CPSF4-204ENST00000436336 VAV1P15498 845 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 CCNCP24863 283 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 IFNAR2P48551 515 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 GNA12Q03113 381 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 CXorf57Q6NSI4 855 aaKnown RBP23.56■■□□□ 1.36
CPSF4-204ENST00000436336 ZNF783Q6ZMS7 281 aa23.56■■□□□ 1.36
CPSF4-204ENST00000436336 CCDC117Q8IWD4 279 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms