RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 AREL1O15033 823 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 APOEP02649 317 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TGM1P22735 817 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 NFKBIAP25963 317 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 SLC36A3Q495N2 470 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TMEM214Q6NUQ4 689 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 AMIGO2Q86SJ2 522 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 PALM2Q8IXS6 379 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 PDPRQ8NCN5 879 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CASP10Q92851 521 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ANKRD36BP1Q96IX9 119 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 DHRS1Q96LJ7 313 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 C1orf50Q9BV19 199 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TSPYL2Q9H2G4 693 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 TCF7L2Q9NQB0 619 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 PDLIM7Q9NR12 457 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 USP17L10C9JJH3 530 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CNOT3O75175 753 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 UGT2B11O75310 529 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 EPHA3P29320 983 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CRKLP46109 303 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 HLCSP50747 726 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 OGDHQ02218 1023 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 PDE1CQ14123 709 aaPredicted RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 SCARA3Q6AZY7 606 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 SLC39A4Q6P5W5 647 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 FASTKD5Q7L8L6 764 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 SDR16C5Q8N3Y7 309 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 IMPG2Q9BZV3 1241 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CCDC68Q9H2F9 335 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 CD209Q9NNX6 404 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 SMYD2Q9NRG4 433 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 SEPT11Q9NVA2 429 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 GPRC5DQ9NZD1 345 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 NYAP2Q9P242 653 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 PAK5Q9P286 719 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 ABCD2Q9UBJ2 740 aa5.26□□□□□ -1.57
RIF1-203ENST00000428287 TCF20Q9UGU0 1960 aaKnown RBP5.26□□□□□ -1.57
RIF1-203ENST00000428287 HCFC1P51610 2035 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TOMM70O94826 608 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 PRSS23O95084 383 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 C4BPAP04003 597 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 TFPTP0C1Z6 253 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 COX4I1P13073 169 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CD58P19256 250 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 KDELR1P24390 212 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 IL4RP24394 825 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 IKZF1Q13422 519 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 DCP2Q8IU60 420 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 MAPKAPK5Q8IW41 473 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TMEM151AQ8N4L1 468 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 PAPD5Q8NDF8 572 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 ZNF516Q92618 1163 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 MRPL46Q9H2W6 279 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 NXF1Q9UBU9 619 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 BRWD3Q6RI45 1802 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 DSPP15924 2871 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 COL2A1P02458 1487 aaPredicted RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 TCF4P15884 667 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TBXAS1P24557 533 aaPredicted RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 NOMO1Q15155 1222 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TATDN1Q6P1N9 297 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TMEM135Q86UB9 458 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TRIML2Q8N7C3 387 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 RDH13Q8NBN7 331 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 RPGRQ92834 1020 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 TP53INP1Q96A56 240 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 FAF2Q96CS3 445 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 MRPL40Q9NQ50 206 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 ANKEF1Q9NU02 776 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 GID8Q9NWU2 228 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 ZNF839A8K0R7 811 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 SLCO1B7G3V0H7 640 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CABYRO75952 493 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 UFL1O94874 794 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 MBL2P11226 248 aaPredicted RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 TPSB2P20231 275 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 DNAJB1P25685 340 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TKTP29401 623 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 ERFP50548 548 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 NME5P56597 212 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 ABCE1P61221 599 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 CYP24A1Q07973 514 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TPSAB1Q15661 275 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 C16orf46Q6P387 395 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 KRT27Q7Z3Y8 459 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CAMK1DQ8IU85 385 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 LRRC47Q8N1G4 583 aaKnown RBP5.25□□□□□ -1.57
RIF1-203ENST00000428287 FAM47BQ8NA70 645 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 ACCSQ96QU6 501 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 LHX5Q9H2C1 402 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 COQ10BQ9H8M1 238 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 TBX20Q9UMR3 447 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 SGK1O00141 431 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 JRKO75564 520 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CSH1P0DML2 217 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 CSH2P0DML3 217 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 SLC1A6P48664 564 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 PRKAA2P54646 552 aa5.25□□□□□ -1.57
RIF1-203ENST00000428287 IFITM3Q01628 133 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms