RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ATG9BQ674R7 924 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 H1FNTQ75WM6 255 aaPredicted RBP5.23□□□□□ -1.57
LINC01040-201ENST00000425048 ZNF367Q7RTV3 350 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 IGFN1Q86VF2 1251 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 IP6K1Q92551 441 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 INPP4AQ96PE3 977 aaPredicted RBP5.23□□□□□ -1.57
LINC01040-201ENST00000425048 DUX5Q96PT3 197 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 COLEC11Q9BWP8 271 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 POLDIP3Q9BY77 421 aaKnown RBP5.23□□□□□ -1.57
LINC01040-201ENST00000425048 OSBPL5Q9H0X9 879 aaPredicted RBP5.23□□□□□ -1.57
LINC01040-201ENST00000425048 OBP2AQ9NY56 170 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 RGL1Q9NZL6 768 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 MAN2B2Q9Y2E5 1009 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 C3orf70A6NLC5 250 aaPredicted RBP5.22□□□□□ -1.57
LINC01040-201ENST00000425048 TSPAN6O43657 245 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 LIASO43766 372 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 PQBP1O60828 265 aaKnown RBP5.22□□□□□ -1.57
LINC01040-201ENST00000425048 TAF5LO75529 589 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 NDST3O95803 873 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 TCEA1P23193 301 aaKnown RBP5.22□□□□□ -1.57
LINC01040-201ENST00000425048 PMS2P54278 862 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 GALEQ14376 348 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 DUSP6Q16828 381 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 AAK1Q2M2I8 961 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 ZNF718Q3SXZ3 478 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 AAGABQ6PD74 315 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.22□□□□□ -1.57
LINC01040-201ENST00000425048 B3GNT4Q9C0J1 378 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 ZNF304Q9HCX3 659 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 FSCN3Q9NQT6 498 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 CA14Q9ULX7 337 aa5.22□□□□□ -1.57
LINC01040-201ENST00000425048 A0A0B4J293 547 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 A0A1W2PPC4 97 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 SRRM3A6NNA2 597 aaPredicted RBP5.21□□□□□ -1.58
LINC01040-201ENST00000425048 SLC16A5O15375 505 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 CGAP01215 116 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 TNFSF8P32971 234 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 STAT1P42224 750 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 TLE3Q04726 772 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 POU5F1BQ06416 359 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 KIF19Q2TAC6 998 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 PLEKHG6Q3KR16 790 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 ZNF672Q499Z4 452 aaPredicted RBP5.21□□□□□ -1.58
LINC01040-201ENST00000425048 C8orf82Q6P1X6 216 aaPredicted RBP5.21□□□□□ -1.58
LINC01040-201ENST00000425048 MDGA2Q7Z553 956 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 GLIS1Q8NBF1 620 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 BICD2Q8TD16 824 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 GDF15Q99988 308 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.21□□□□□ -1.58
LINC01040-201ENST00000425048 RETREG1Q9H6L5 497 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 HELLSQ9NRZ9 838 aa5.21□□□□□ -1.58
LINC01040-201ENST00000425048 LOC102724159A0A0B4J2E5 919 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 PLSCR5A0PG75 271 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 SAC3D1A6NKF1 404 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 APOL1O14791 398 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 KPNA5O15131 536 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 KRT36O76013 467 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 S100BP04271 92 aaPredicted RBP5.2□□□□□ -1.58
LINC01040-201ENST00000425048 TSHRP16473 764 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 ADPRHP54922 357 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 PLCB4Q15147 1175 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 PWP2Q15269 919 aaKnown RBP5.2□□□□□ -1.58
LINC01040-201ENST00000425048 KRTAP24-1Q3LI83 254 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 ANKRD40Q6AI12 368 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 WBP2NLQ6ICG8 309 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 Q6ZSV7 163 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 HES6Q96HZ4 224 aa5.2□□□□□ -1.58
LINC01040-201ENST00000425048 DDX31Q9H8H2 851 aaKnown RBP5.2□□□□□ -1.58
LINC01040-201ENST00000425048 TRBV5-7A0A0A0MS05 114 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 MCIDASD6RGH6 385 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 STMND1H3BQB6 276 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 STT3AP46977 705 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 CASP5P51878 434 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 ARL13BQ3SXY8 428 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 KLBQ86Z14 1044 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 DPP10Q8N608 796 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 OR14A16Q8NHC5 309 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 FBXO4Q9UKT5 387 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 SLC12A4Q9UP95 1085 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 DTNAQ9Y4J8 743 aa5.19□□□□□ -1.58
LINC01040-201ENST00000425048 CYP3A7-CYP3A51PA0A087WV96 503 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 LOC105369274A0A096LPK9 316 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 LOC102723532A0A0G2JNH3 316 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 ASAP2O43150 1006 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 NTSR2O95665 410 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 CYP3A4P08684 503 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 ZNF12P17014 697 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 CYP3A7P24462 503 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 DLX5P56178 289 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 FOXL2P58012 376 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 TAS2R50P59544 299 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 RPL15P61313 204 aaKnown RBP5.18□□□□□ -1.58
LINC01040-201ENST00000425048 SLC39A14Q15043 492 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 HLFQ16534 295 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 FJX1Q86VR8 437 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 CCDC25Q86WR0 208 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 OR4N4Q8N0Y3 316 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 TXLNBQ8N3L3 684 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 JDP2Q8WYK2 163 aa5.18□□□□□ -1.58
LINC01040-201ENST00000425048 TTC17Q96AE7 1141 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms