RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ANKS1BQ7Z6G8 1248 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 KIAA0907Q7Z7F0 614 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-202ENST00000422991 C17orf53Q8N3J3 647 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-202ENST00000422991 UBL4BQ8N7F7 174 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 OR52K2Q8NGK3 314 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 EXD1Q8NHP7 514 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 PBXIP1Q96AQ6 731 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 TBC1D17Q9HA65 648 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 NDFIP2Q9NV92 336 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 GGA2Q9UJY4 613 aa17.46■□□□□ 0.39
COL7A1-202ENST00000422991 ARIH1Q9Y4X5 557 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-202ENST00000422991 DCLK1O15075 740 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 APODP05090 189 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 RHOCP08134 193 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 PABPC1P11940 636 aaKnown RBP17.45■□□□□ 0.38
COL7A1-202ENST00000422991 AMPD1P23109 780 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 CDKN2BP42772 138 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 OXCT1P55809 520 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 RWDD2BP57060 319 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 GEN1Q17RS7 908 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 FUT11Q495W5 492 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 ODF2Q5BJF6 829 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 ANKRD20A8PQ5CZ79 823 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 ZNF569Q5MCW4 686 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 MFSD7Q6UXD7 560 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 ZNF783Q6ZMS7 281 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 SPOCD1Q6ZMY3 1216 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 SFTPA1Q8IWL2 248 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 ZNF687Q8N1G0 1237 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 PCDH19Q8TAB3 1148 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 WFIKKN2Q8TEU8 576 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 EZH1Q92800 747 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-202ENST00000422991 RNF25Q96BH1 459 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-202ENST00000422991 RBM41Q96IZ5 413 aaKnown RBP17.45■□□□□ 0.38
COL7A1-202ENST00000422991 LTB4R2Q9NPC1 389 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 ETNK2Q9NVF9 386 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.45■□□□□ 0.38
COL7A1-202ENST00000422991 KIAA1522Q9P206 1035 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-202ENST00000422991 DNAI1Q9UI46 699 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 ZKSCAN5Q9Y2L8 839 aa17.45■□□□□ 0.38
COL7A1-202ENST00000422991 NYNRINQ9P2P1 1898 aaKnown RBP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 A0A0A0MRY4 1105 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 KANSL1LA0AUZ9 987 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 ILVBLA1L0T0 632 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 ZRANB2O95218 330 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 DRD1P21728 446 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 CSKP41240 450 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 GRSF1Q12849 480 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 SLC12A1Q13621 1099 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 PLEKHG6Q3KR16 790 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 DCAF12L1Q5VU92 463 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 RCOR2Q8IZ40 523 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 AHI1Q8N157 1196 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 UMODL1-AS1Q8N2C9 162 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 SLC35F6Q8N357 371 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 PQLC3Q8N755 202 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 ALG14Q96F25 216 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 RNF157Q96PX1 679 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 FOXQ1Q9C009 403 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 KLC2Q9H0B6 622 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 NOL6Q9H6R4 1146 aaKnown RBP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 DONSONQ9NYP3 566 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 INTS6Q9UL03 887 aaKnown RBP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 NDRG2Q9UN36 371 aaKnown RBP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 MRPS17Q9Y2R5 130 aaKnown RBP17.44■□□□□ 0.38
COL7A1-202ENST00000422991 MFHAS1Q9Y4C4 1052 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 OR51B4Q9Y5P0 310 aa17.44■□□□□ 0.38
COL7A1-202ENST00000422991 PRRT4C9JH25 899 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 RAMP2O60895 175 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 EGFP01133 1207 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 MZF1P28698 734 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-202ENST00000422991 DNA2P51530 1060 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 PLK1P53350 603 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 COPS2P61201 443 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 GNA12Q03113 381 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 CCINQ13939 588 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 DMC1Q14565 340 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 RPS6KA1Q15418 735 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 PPP2R5EQ16537 467 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 PITRM1Q5JRX3 1037 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 RNF219Q5W0B1 726 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-202ENST00000422991 TMEM215Q68D42 235 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 ADIPOR2Q86V24 386 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 CCDC50Q8IVM0 306 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 FBXL6Q8N531 539 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 NPWQ8N729 165 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 FEM1AQ9BSK4 669 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 TLR10Q9BXR5 811 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 MUC3BQ9H195 1237 aa17.43■□□□□ 0.38
COL7A1-202ENST00000422991 hCG_1818297A0A087WSY0 165 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 A0A0D9SEW6 157 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 TBC1D3BA6NDS4 549 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 K7EQS6 105 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 CHRM1P11229 460 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-202ENST00000422991 MSNP26038 577 aaKnown RBP17.42■□□□□ 0.38
COL7A1-202ENST00000422991 PTPN7P35236 360 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 TNFRSF4P43489 277 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 UBXN2BQ14CS0 331 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms