RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ISG20Q96AZ6 181 aaKnown RBP6.58□□□□□ -1.36
USP54-202ENST00000413442 CALR3Q96L12 384 aaKnown RBP6.58□□□□□ -1.36
USP54-202ENST00000413442 NAP1L5Q96NT1 182 aaPredicted RBP6.58□□□□□ -1.36
USP54-202ENST00000413442 SYT11Q9BT88 431 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 NUSAP1Q9BXS6 441 aaKnown RBP6.58□□□□□ -1.36
USP54-202ENST00000413442 CEP44Q9C0F1 390 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 MAGEH1Q9H213 219 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 CATSPERBQ9H7T0 1116 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 ZDHHC4Q9NPG8 344 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 PRSS16Q9NQE7 514 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 PIGVQ9NUD9 493 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 ZNHIT6Q9NWK9 470 aaKnown RBP6.58□□□□□ -1.36
USP54-202ENST00000413442 C2orf42Q9NWW7 574 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 OR12D3Q9UGF7 316 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 ADAMTS1Q9UHI8 967 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 HCN2Q9UL51 889 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 HPCAL4Q9UM19 191 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 SLC6A14Q9UN76 642 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 HS3ST2Q9Y278 367 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 HS3ST4Q9Y661 456 aa6.58□□□□□ -1.36
USP54-202ENST00000413442 IGHV1OR15-9A0A0B4J2B8 117 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 GOLGA6L7A0A1B0GV03 622 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 TCRBV5S1A1TA0A578 114 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 LRRC53A6NM62 1247 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 WASH4PA8MWX3 477 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 E9PAM4 449 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 C1QTNF3-AMACRE9PGA6 284 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 GOLGA8SH3BPF8 625 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 SCAMP3O14828 347 aaKnown RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 SLC30A4O14863 429 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 TRIM24O15164 1050 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 EPHB6O15197 1021 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 FGF10O15520 208 aaPredicted RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 MAGEC1O60732 1142 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 RNGTTO60942 597 aaKnown RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 GRAP2O75791 330 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 MOCS2O96007 188 aaPredicted RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 CALCAP01258 141 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 FTLP02792 175 aaPredicted RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 RHOCP08134 193 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 NDUFV2P19404 249 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 OR1E1P30953 314 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CD70P32970 193 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 RFC1P35251 1148 aaPredicted RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 FLT3P36888 993 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 MPLP40238 635 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 PBX1P40424 430 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CSKP41240 450 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 RECQLP46063 649 aaPredicted RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 PXNP49023 591 aaPredicted RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 TPMTP51580 245 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 SUOXP51687 545 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 RPL6Q02878 288 aaKnown RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 RAD51Q06609 339 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 DMWDQ09019 674 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 SPEM2Q0P670 501 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 MESP2Q0VG99 397 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 GRM3Q14832 879 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 PTPRNQ16849 979 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CCDC14Q49A88 953 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 PPP1R15BQ5SWA1 713 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 LYSMD4Q5XG99 296 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 DNAJC24Q6P3W2 148 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 WDR59Q6PJI9 974 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 MMS22LQ6ZRQ5 1243 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CYP2U1Q7Z449 544 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 LRRC49Q8IUZ0 686 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 KIAA2013Q8IYS2 634 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 ZNF683Q8IZ20 524 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 LZTR1Q8N653 840 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 DCAF4L2Q8NA75 395 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 TMIEQ8NEW7 156 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 OR8K1Q8NGG5 319 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 SLC30A5Q8TAD4 765 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 ADAM32Q8TC27 787 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 HCAR2Q8TDS4 363 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 BHMTQ93088 406 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 ALG14Q96F25 216 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CFAP57Q96MR6 1250 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 PRICKLE1Q96MT3 831 aaPredicted RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 ACOX2Q99424 681 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 TBCBQ99426 244 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 TTYH3Q9C0H2 523 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 BTBD1Q9H0C5 482 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 SIK2Q9H0K1 926 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 ARRDC1-AS1Q9H2J1 176 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 HAUS4Q9H6D7 363 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 TMEM248Q9NWD8 314 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CACNA2D2Q9NY47 1150 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CALCOCO1Q9P1Z2 691 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 PILRBQ9UKJ0 227 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 CDV3Q9UKY7 258 aaKnown RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 INTS6Q9UL03 887 aaKnown RBP6.57□□□□□ -1.36
USP54-202ENST00000413442 VANGL2Q9ULK5 521 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 USP18Q9UMW8 372 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 OR51B4Q9Y5P0 310 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 FAM186AA6NE01 2351 aa6.57□□□□□ -1.36
USP54-202ENST00000413442 TNRC6BQ9UPQ9 1833 aaKnown RBP6.56□□□□□ -1.36
USP54-202ENST00000413442 A0A1B0GTW7 788 aa6.56□□□□□ -1.36
USP54-202ENST00000413442 SSU72P8A0A1W2PR75 194 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 503.4 ms