RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 KYQ8NBH2 561 aa8.68□□□□□ -1.02
PBRM1-209ENST00000412587 PABPC5Q96DU9 382 aaKnown RBP8.68□□□□□ -1.02
PBRM1-209ENST00000412587 HAPLN3Q96S86 360 aa8.68□□□□□ -1.02
PBRM1-209ENST00000412587 POP1Q99575 1024 aaKnown RBP8.68□□□□□ -1.02
PBRM1-209ENST00000412587 SP140LQ9H930 580 aa8.68□□□□□ -1.02
PBRM1-209ENST00000412587 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
PBRM1-209ENST00000412587 H3BSA7 217 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TLR2O60603 784 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CST8O60676 142 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 PSMA4P25789 261 aaKnown RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 ADSLP30566 484 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 THOP1P52888 689 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 POU5F1BQ06416 359 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 ANO4Q32M45 955 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SPDYAQ5MJ70 313 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 ZNF544Q6NX49 715 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TAF2Q6P1X5 1199 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 OR7G1Q8NGA0 311 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 PROX1Q92786 737 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 DYRK4Q9NR20 520 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CHORDC1Q9UHD1 332 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 GNEQ9Y223 722 aaKnown RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TRIM64A6NGJ6 449 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TRIM64BA6NI03 449 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 E5RI56 91 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CYB561D2O14569 222 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SRP72O76094 671 aaKnown RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 ATXN8OSP0DMR3 200 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 FECHP22830 423 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 NSUN2Q08J23 767 aaKnown RBP eCLIP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SMAD1Q15797 465 aaKnown RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CCDC85BQ15834 202 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CLPPQ16740 277 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TMEM119Q4V9L6 283 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 BOLA3Q53S33 107 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 IQSEC1Q6DN90 963 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 PLEKHM3Q6ZWE6 761 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 UTS2BQ765I0 119 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 ZBTB46Q86UZ6 589 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CHSY1Q86X52 802 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 WDR49Q8IV35 697 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 ASCC1Q8N9N2 400 aaKnown RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TDRD5Q8NAT2 981 aaKnown RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 GSTCDQ8NEC7 633 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CDC26Q8NHZ8 85 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 DNAJB3Q8WWF6 145 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 HTRA1Q92743 480 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CXorf21Q9HAI6 301 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SLCO1B3Q9NPD5 702 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 XPNPEP3Q9NQH7 507 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 UBA6A0AVT1 1052 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SAGE2PA6NJ88 616 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TNFRSF10AO00220 468 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SGPL1O95470 568 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 RBP3P10745 1247 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 ME2P23368 584 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 PEX2P28328 305 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 CRABP2P29373 138 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TYK2P29597 1187 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SPRED3Q2MJR0 410 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 C3orf62Q6ZUJ4 267 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 SYTL1Q8IYJ3 562 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 KIAA0895Q8NCT3 520 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 FAM172AQ8WUF8 416 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TRAPPC12Q8WVT3 735 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 HDAC2Q92769 488 aaKnown RBP8.67□□□□□ -1.02
PBRM1-209ENST00000412587 AIFM2Q9BRQ8 373 aa8.67□□□□□ -1.02
PBRM1-209ENST00000412587 TMEM150BA6NC51 233 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 TMCC2O75069 709 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 CXCL8P10145 99 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 FCGR1AP12314 374 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 ADCYAP1R1P41586 468 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 MYL6P60660 151 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 YWHAHQ04917 246 aaPredicted RBP8.66□□□□□ -1.02
PBRM1-209ENST00000412587 TRAF3Q13114 568 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 ORC1Q13415 861 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 SMTNL2Q2TAL5 461 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 PAN2Q504Q3 1202 aaKnown RBP8.66□□□□□ -1.02
PBRM1-209ENST00000412587 HABP4Q5JVS0 413 aaKnown RBP8.66□□□□□ -1.02
PBRM1-209ENST00000412587 C10orf120Q5SQS8 335 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 TTC39BQ5VTQ0 682 aaPredicted RBP8.66□□□□□ -1.02
PBRM1-209ENST00000412587 BROXQ5VW32 411 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 DUPD1Q68J44 220 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 OTOAQ7RTW8 1153 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 KDELC2Q7Z4H8 507 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 CCDC60Q8IWA6 550 aaPredicted RBP8.66□□□□□ -1.02
PBRM1-209ENST00000412587 SPATA18Q8TC71 538 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 GATA6Q92908 595 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 ARHGEF26Q96DR7 871 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 MED30Q96HR3 178 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
PBRM1-209ENST00000412587 CNPY3Q9BT09 278 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 CENPOQ9BU64 300 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 C6orf62Q9GZU0 229 aaPredicted RBP8.66□□□□□ -1.02
PBRM1-209ENST00000412587 THAP2Q9H0W7 228 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 TAS2R1Q9NYW7 299 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 ZNF224Q9NZL3 707 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 SLIT3O75094 1523 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 K7EPI3 171 aa8.66□□□□□ -1.02
PBRM1-209ENST00000412587 ZNF862O60290 1169 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms