RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 CASQ1P31415 396 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 CD70P32970 193 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 PTPN7P35236 360 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 AMPD2Q01433 879 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 MESP2Q0VG99 397 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 LMAN2Q12907 356 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 SLC9A4Q6AI14 798 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 CELF6Q96J87 481 aaKnown RBP34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 OSBPL9Q96SU4 736 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 KLC2Q9H0B6 622 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 DONSONQ9NYP3 566 aa34.17■■■■□ 3.06
CSNK1E-204ENST00000403904 TXNDC11Q6PKC3 985 aa34.16■■■■□ 3.06
CSNK1E-204ENST00000403904 RALGPS2Q86X27 583 aaPredicted RBP34.16■■■■□ 3.06
CSNK1E-204ENST00000403904 PLD5Q8N7P1 536 aa34.16■■■■□ 3.06
CSNK1E-204ENST00000403904 UHRF1Q96T88 793 aaPredicted RBP34.16■■■■□ 3.06
CSNK1E-204ENST00000403904 NOL6Q9H6R4 1146 aaKnown RBP34.16■■■■□ 3.06
CSNK1E-204ENST00000403904 KIAA1522Q9P206 1035 aaPredicted RBP34.16■■■■□ 3.06
CSNK1E-204ENST00000403904 F5P12259 2224 aa34.16■■■■□ 3.06
CSNK1E-204ENST00000403904 APOL1O14791 398 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 KDSRQ06136 332 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 TFDP2Q14188 446 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 RNF219Q5W0B1 726 aaPredicted RBP34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 PAPD7Q5XG87 772 aaKnown RBP34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 UMODL1-AS1Q8N2C9 162 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 ZNF557Q8N988 423 aaPredicted RBP34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 LMLNQ96KR4 655 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 CA14Q9ULX7 337 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 EFR3BQ9Y2G0 817 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 A0A0D9SEW6 157 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 CEP104O60308 925 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 MZF1P28698 734 aaPredicted RBP34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 EIF2DP41214 584 aaKnown RBP34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 CSKP41240 450 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 GRAMD4Q6IC98 578 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 TP53INP2Q8IXH6 220 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 UBALD2Q8IYN6 164 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 COG1Q8WTW3 980 aa34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 FBRSL1Q9HCM7 1045 aaKnown RBP34.15■■■■□ 3.06
CSNK1E-204ENST00000403904 CHD5Q8TDI0 1954 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 ILVBLA1L0T0 632 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 RAMP2O60895 175 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 GALK1P51570 392 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 PAFAH1B3Q15102 231 aaKnown RBP34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 PBKQ96KB5 322 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 PNKPQ96T60 521 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 MUC3BQ9H195 1237 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 GGA2Q9UJY4 613 aa34.14■■■■□ 3.06
CSNK1E-204ENST00000403904 MFSD11O43934 449 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 GLULP15104 373 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 ZFXP17010 805 aaPredicted RBP34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 GNA12Q03113 381 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 GBE1Q04446 702 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 POLD3Q15054 466 aaPredicted RBP34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 GEN1Q17RS7 908 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 C1orf228Q6PIY5 440 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 TPRG1Q6ZUI0 275 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 BBS12Q6ZW61 710 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 PHTF2Q8N3S3 785 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 LZTR1Q8N653 840 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 OR7D4Q8NG98 312 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 P2RY13Q9BPV8 354 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 FEM1AQ9BSK4 669 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 SLC39A8Q9C0K1 460 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 PRDM16Q9HAZ2 1276 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 SAE1Q9UBE0 346 aaPredicted RBP34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 FBXL21Q9UKT6 434 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 SLC27A6Q9Y2P4 619 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 HEY1Q9Y5J3 304 aa34.13■■■■□ 3.05
CSNK1E-204ENST00000403904 ESPNB1AK53 854 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 PALM2-AKAP2B1ALY0 433 aaPredicted RBP34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 MAP3K6O95382 1288 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 PABPC1P11940 636 aaKnown RBP34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 SERPINB6P35237 376 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 MLF2Q15773 248 aaPredicted RBP34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 NPNTQ6UXI9 565 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 ARHGAP12Q8IWW6 846 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 APCDD1Q8J025 514 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 CCDC33Q8N5R6 958 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 LRRC19Q9H756 370 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 WNT16Q9UBV4 365 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 INTS6Q9UL03 887 aaKnown RBP34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 SAR1BQ9Y6B6 198 aa34.12■■■■□ 3.05
CSNK1E-204ENST00000403904 ZNF185O15231 689 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 TJP3O95049 919 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 TCP1P17987 556 aaKnown RBP34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 ACVRL1P37023 503 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 NDST2P52849 883 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 OXCT1P55809 520 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 AFMIDQ63HM1 303 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 SLC13A5Q86YT5 568 aaPredicted RBP34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 DDX51Q8N8A6 666 aaKnown RBP eCLIP34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 ZNF592Q92610 1267 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 ALG14Q96F25 216 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 MS4A14Q96JA4 679 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 ARHGEF3Q9NR81 526 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 OR51B4Q9Y5P0 310 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 NCOR1O75376 2440 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 TCRBV7S2A1N4TA0A589 114 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 SHISA7A6NL88 538 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 RASA4BC9J798 803 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms