RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 PLD1Q13393 1074 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 ITGA9Q13797 1035 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 IKBKEQ14164 716 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 LDLRAD1Q5T700 205 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 GDF6Q6KF10 455 aaPredicted RBP19.27■□□□□ 0.67
CSPG5-202ENST00000383738 LRRC8BQ6P9F7 803 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 OR6Y1Q8NGX8 325 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 PTPN18Q99952 460 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 ZNF395Q9H8N7 513 aaPredicted RBP19.27■□□□□ 0.67
CSPG5-202ENST00000383738 TRPM5Q9NZQ8 1165 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 HACD3Q9P035 362 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 LSM7Q9UK45 103 aaKnown RBP19.27■□□□□ 0.67
CSPG5-202ENST00000383738 SLC8A2Q9UPR5 921 aa19.27■□□□□ 0.67
CSPG5-202ENST00000383738 KLRC2P26717 231 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 OR1D2P34982 312 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 DUSP4Q13115 394 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 SNRNP25Q9BV90 132 aaKnown RBP19.26■□□□□ 0.67
CSPG5-202ENST00000383738 FZD8Q9H461 694 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 PREBQ9HCU5 417 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 NR2E3Q9Y5X4 410 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 MSI1O43347 362 aaKnown RBP19.26■□□□□ 0.67
CSPG5-202ENST00000383738 LYPLA1O75608 230 aaPredicted RBP19.26■□□□□ 0.67
CSPG5-202ENST00000383738 TRUB2O95900 331 aaKnown RBP19.26■□□□□ 0.67
CSPG5-202ENST00000383738 VAV1P15498 845 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 POU6F1Q14863 301 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 ZNF792Q3KQV3 632 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 SH3PXD2AQ5TCZ1 1133 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 CYP2R1Q6VVX0 501 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 SATL1Q86VE3 508 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 ULK2Q8IYT8 1036 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 NRLP54845 237 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 GRIK3Q13003 919 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 PDK3Q15120 406 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 LIN52Q52LA3 116 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 TTC39BQ5VTQ0 682 aaPredicted RBP19.26■□□□□ 0.67
CSPG5-202ENST00000383738 ANKRD27Q96NW4 1050 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 RHOBTB2Q9BYZ6 727 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 SAR1AQ9NR31 198 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 RBM22Q9NW64 420 aaKnown RBP eCLIP19.26■□□□□ 0.67
CSPG5-202ENST00000383738 CCDC88AQ3V6T2 1871 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 ZMYM2Q9UBW7 1377 aa19.26■□□□□ 0.67
CSPG5-202ENST00000383738 LILRA4P59901 499 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 TPGS1Q6ZTW0 290 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 LPCAT2Q7L5N7 544 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 PTPRN2Q92932 1015 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 TBCBQ99426 244 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 E5RI56 91 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 KLHL2O95198 593 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 ST13P5Q8NFI4 369 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-202ENST00000383738 LRRC19Q9H756 370 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 CATSPERBQ9H7T0 1116 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 TBC1D23Q9NUY8 699 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 SLC39A10Q9ULF5 831 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 TOMM70O94826 608 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 GOT1P17174 413 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 KDELR1P24390 212 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 YWHAQP27348 245 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 ACLYP53396 1101 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 HDAC4P56524 1084 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 ZCCHC9Q8N567 271 aaKnown RBP19.25■□□□□ 0.67
CSPG5-202ENST00000383738 CLEC4CQ8WTT0 213 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 MARK4Q96L34 752 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 LGMNQ99538 433 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 PAMP19021 973 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 STIP1P31948 543 aaKnown RBP19.25■□□□□ 0.67
CSPG5-202ENST00000383738 AVPR1AP37288 418 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 USP10Q14694 798 aaKnown RBP19.25■□□□□ 0.67
CSPG5-202ENST00000383738 ZNF618Q5T7W0 954 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 COLGALT1Q8NBJ5 622 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 MRPS31Q92665 395 aaKnown RBP19.25■□□□□ 0.67
CSPG5-202ENST00000383738 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.25■□□□□ 0.67
CSPG5-202ENST00000383738 MMADHCQ9H3L0 296 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-202ENST00000383738 PLK2Q9NYY3 685 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 KANSL3Q9P2N6 904 aa19.25■□□□□ 0.67
CSPG5-202ENST00000383738 EP400Q96L91 3159 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 SIGLEC16A6NMB1 481 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CYBBP04839 570 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 VCPP55072 806 aaKnown RBP19.24■□□□□ 0.67
CSPG5-202ENST00000383738 MFSD5Q6N075 450 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CIPCQ9C0C6 399 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 EBF3Q9H4W6 596 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 SLC24A2Q9UI40 661 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 MYH11P35749 1972 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CHRM1P11229 460 aaPredicted RBP19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CHRNB2P17787 502 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 PSMC3P17980 439 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 MMP8P22894 467 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CLVS1Q8IUQ0 354 aaPredicted RBP19.24■□□□□ 0.67
CSPG5-202ENST00000383738 TRIM62Q9BVG3 475 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 ST6GALNAC4Q9H4F1 302 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 OR12D3Q9UGF7 316 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 MARF1Q9Y4F3 1742 aaKnown RBP19.24■□□□□ 0.67
CSPG5-202ENST00000383738 BTNL10A8MVZ5 291 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CD48P09326 243 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CCR1P32246 355 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 CCDC92Q53HC0 331 aaPredicted RBP19.24■□□□□ 0.67
CSPG5-202ENST00000383738 PLEKHA7Q6IQ23 1121 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 ANKRD52Q8NB46 1076 aa19.24■□□□□ 0.67
CSPG5-202ENST00000383738 RSPH1Q8WYR4 309 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms