RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 PCDHA11Q9Y5I1 949 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 TCRBV9S1A1TA0A576 114 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 DCDC2CA8MYV0 355 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 EDF1O60869 148 aaKnown RBP11.5□□□□□ -0.57
RPGR-203ENST00000378505 PSMG1O95456 288 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 ERBB2P04626 1255 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 FAM58BPP0C7Q3 252 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 SERPINH1P50454 418 aaKnown RBP11.5□□□□□ -0.57
RPGR-203ENST00000378505 ZNF284Q2VY69 593 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 SAMD4BQ5PRF9 694 aaKnown RBP11.5□□□□□ -0.57
RPGR-203ENST00000378505 FAM171A1Q5VUB5 890 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 VPS33AQ96AX1 596 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 PGLYRP2Q96PD5 576 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 RNF19AQ9NV58 838 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 COG5Q9UP83 839 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 R3HDM2Q9Y2K5 976 aaKnown RBP11.5□□□□□ -0.57
RPGR-203ENST00000378505 F8W810 466 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 FARP2O94887 1054 aaPredicted RBP11.5□□□□□ -0.57
RPGR-203ENST00000378505 ZNF7P17097 686 aaPredicted RBP11.5□□□□□ -0.57
RPGR-203ENST00000378505 GRM5P41594 1212 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 PLK1P53350 603 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 CCDC15Q0P6D6 951 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 XRCC4Q13426 336 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 LLGL2Q6P1M3 1020 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 RIPOR1Q6ZS17 1223 aa11.5□□□□□ -0.57
RPGR-203ENST00000378505 KDM1AO60341 852 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 BANF1O75531 89 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 C4BPAP04003 597 aaKnown RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 RAG1P15918 1043 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 ERCC2P18074 760 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 MATKP42679 507 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 EPHB3P54753 998 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 OR6Y1Q8NGX8 325 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 FNIP1Q8TF40 1166 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 NKD2Q969F2 451 aaPredicted RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 ACOX2Q99424 681 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 NEUROG2Q9H2A3 272 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 LRRC4CQ9HCJ2 640 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 CCDC167Q9P0B6 97 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 MORF4L1Q9UBU8 362 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 A0A087X1B8 175 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 PIAS1O75925 651 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 ARF4P18085 180 aaPredicted RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 ABCG1P45844 678 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 CCNG1P51959 295 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 PTP4A2Q12974 167 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 BSNDQ8WZ55 320 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 CASP10Q92851 521 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 FAM120BQ96EK7 910 aaKnown RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 TMEM109Q9BVC6 243 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 POLR1EQ9GZS1 481 aaKnown RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 PARVBQ9HBI1 364 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 CDH9Q9ULB4 789 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 RPL26L1Q9UNX3 145 aaKnown RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 TRIM69Q86WT6 500 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 STX19Q8N4C7 294 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 C12orf29Q8N999 325 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 OR56A4Q8NGH8 313 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 METTL6Q8TCB7 284 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 KLRG1Q96E93 195 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 MBOAT7Q96N66 472 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 ADAM2Q99965 735 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 KCTD14Q9BQ13 255 aaPredicted RBP11.49□□□□□ -0.57
RPGR-203ENST00000378505 TMEM79Q9BSE2 394 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 LZTS1Q9Y250 596 aa11.49□□□□□ -0.57
RPGR-203ENST00000378505 TMEM114B3SHH9 223 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 RAD51BO15315 384 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 BIRC5O15392 142 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 GOT1P17174 413 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 NFKB1P19838 968 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 ATP6V1B2P21281 511 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 SCNN1GP51170 649 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 FRG1Q14331 258 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 PREPLQ4J6C6 727 aaPredicted RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 CCDC81Q6ZN84 652 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 LRRC49Q8IUZ0 686 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 OSCP1Q8WVF1 389 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 LENG9Q96B70 501 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 DPY30Q9C005 99 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 PCDH18Q9HCL0 1135 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 PAPOLBQ9NRJ5 636 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 MARCH2Q9P0N8 246 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 C15orf38-AP3S2A0A0A6YYH1 394 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 INPP4BO15327 924 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 ARHGEF9O43307 516 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 VPS4BO75351 444 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 GJB1P08034 283 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 SLC2A4P14672 509 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 HADHBP55084 474 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 DGKZQ13574 1117 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 SLC39A12Q504Y0 691 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 ARPINQ7Z6K5 226 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 LGI2Q8N0V4 545 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 MIER2Q8N344 545 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 DIS3LQ8TF46 1054 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 BDH2Q9BUT1 245 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 POMKQ9H5K3 350 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 DDX28Q9NUL7 540 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms