RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 NEMP1O14524 444 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 NUMBP49757 651 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 TAF5Q15542 800 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 LDHDQ86WU2 507 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 THNSL1Q8IYQ7 743 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 UNC5BQ8IZJ1 945 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 PTCD2Q8WV60 388 aaKnown RBP21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 TFAP2CQ92754 450 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 TMA16Q96EY4 203 aaKnown RBP21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 OLFM1Q99784 485 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 PCDHAC1Q9H158 963 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 TMEM216Q9P0N5 145 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 COPG2Q9UBF2 871 aa21.02■□□□□ 0.96
TMEFF1-201ENST00000374879 COL2A1P02458 1487 aaPredicted RBP21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 E2F8A0AVK6 867 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 YDJCA8MPS7 323 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 WDR64B1ANS9 1081 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 DYNC1LI2O43237 492 aaPredicted RBP21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 SNAP91O60641 907 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 LRCH4O75427 683 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 PSMA2P25787 234 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 ETFBP38117 255 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 TRPC3Q13507 836 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 ART3Q13508 389 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 CUL2Q13617 745 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 USP37Q86T82 979 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 KIAA0319LQ8IZA0 1049 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 SIX6OS1Q8N1H7 587 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 EFHD2Q96C19 240 aaPredicted RBP21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 CLIP3Q96DZ5 547 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 UNKQ9C0B0 810 aaKnown RBP21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 B3GNT3Q9Y2A9 372 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 TIMM22Q9Y584 194 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 SLC30A1Q9Y6M5 507 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 KPNA4O00629 521 aaPredicted RBP21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 CALB1P05937 261 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 APRTP07741 180 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 NFATC3Q12968 1075 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 OXA1LQ15070 435 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 TAZQ16635 292 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 PPM1JQ5JR12 505 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 STYK1Q6J9G0 422 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 HMBOX1Q6NT76 420 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 ZBTB49Q6ZSB9 765 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 NIPA2Q8N8Q9 360 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 KCTD6Q8NC69 237 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 MXRA8Q9BRK3 442 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 POLR1BQ9H9Y6 1135 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 ZNF358Q9NW07 568 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 PCSK1NQ9UHG2 260 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 CPQQ9Y646 472 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 CDY2AQ9Y6F7 541 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 CDY1Q9Y6F8 540 aa21.01■□□□□ 0.95
TMEFF1-201ENST00000374879 IQCA1LA6NCM1 817 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 SPDYE2BA6NHP3 402 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 TRIM64BA6NI03 449 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 A8MU76 341 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 SOCS2O14508 198 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 AKAP10O43572 662 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 SPDYE6P0CI01 402 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 ITGB5P18084 799 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 HMGB2P26583 209 aaKnown RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 ADORA2AP29274 412 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 NLRP11P59045 1033 aaKnown RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 SPDYE2Q495Y8 402 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 WDR78Q5VTH9 848 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 SLCO4A1Q96BD0 722 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 RIT2Q99578 217 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 CTRCQ99895 268 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 KLHL25Q9H0H3 589 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 C20orf96Q9NUD7 363 aaPredicted RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 PTBP2Q9UKA9 531 aaKnown RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 PCDHB12Q9Y5F1 795 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 ZBTB17Q13105 803 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 TDRD10Q5VZ19 366 aaKnown RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 VASH1Q7L8A9 365 aaPredicted RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 HERC6Q8IVU3 1022 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 TMEM161BQ8NDZ6 487 aa21■□□□□ 0.95
TMEFF1-201ENST00000374879 RBAKQ9NYW8 714 aaPredicted RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 IPO11Q9UI26 975 aaKnown RBP21■□□□□ 0.95
TMEFF1-201ENST00000374879 VAPBO95292 243 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 HSPA4LO95757 839 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 KRT7P08729 469 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 GRIA3P42263 894 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 MLLT10P55197 1068 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 WNT7BP56706 349 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 ARPC4P59998 168 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 LSM12Q3MHD2 195 aaKnown RBP20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 ARL13BQ3SXY8 428 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 FAM102BQ5T8I3 360 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 KCNT2Q6UVM3 1135 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 NAPRTQ6XQN6 538 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 RAVER1Q8IY67 606 aaKnown RBP20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 CNDP1Q96KN2 507 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 NPAS2Q99743 824 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 HERC2P3Q9BVR0 1158 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 CALN1Q9BXU9 219 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 ADA2Q9NZK5 511 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 DCDC2Q9UHG0 476 aa20.99■□□□□ 0.95
TMEFF1-201ENST00000374879 BRWD3Q6RI45 1802 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms