RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TBL1YQ9BQ87 522 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 DPY30Q9C005 99 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 CBFA2T3O75081 653 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 SNRPB2P08579 225 aaKnown RBP16.21■□□□□ 0.19
COL17A1-202ENST00000369733 NEK3P51956 506 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 HK2P52789 917 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 ACOX2Q99424 681 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 EBNA1BP2Q99848 306 aaKnown RBP16.21■□□□□ 0.19
COL17A1-202ENST00000369733 LGALS13Q9UHV8 139 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 RRN3P2A6NIE6 340 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 IRF1P10914 325 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 ODC1P11926 461 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 PIK3R1P27986 724 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 KRT20P35900 424 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 BLVRAP53004 296 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 ADIGQ0VDE8 80 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 TMEM63BQ5T3F8 832 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 BROXQ5VW32 411 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 TDRD10Q5VZ19 366 aaKnown RBP16.21■□□□□ 0.19
COL17A1-202ENST00000369733 SYTL1Q8IYJ3 562 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 OR52K1Q8NGK4 314 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 RSPH1Q8WYR4 309 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 WDR18Q9BV38 432 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 CLK4Q9HAZ1 481 aaKnown RBP16.21■□□□□ 0.19
COL17A1-202ENST00000369733 KLHL3Q9UH77 587 aa16.21■□□□□ 0.19
COL17A1-202ENST00000369733 PNMA8BQ9ULN7 279 aaPredicted RBP16.21■□□□□ 0.19
COL17A1-202ENST00000369733 MAGEC1O60732 1142 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 BPGMP07738 259 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 ACAT1P24752 427 aaKnown RBP16.21■□□□□ 0.18
COL17A1-202ENST00000369733 PTGIRP43119 386 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 ZNF143P52747 638 aaPredicted RBP16.21■□□□□ 0.18
COL17A1-202ENST00000369733 GPR107Q5VW38 600 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 AMIGO2Q86SJ2 522 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 HS6ST3Q8IZP7 471 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 ELMOD1Q8N336 334 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 PHF21AQ96BD5 680 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 ZNF512Q96ME7 567 aaPredicted RBP16.21■□□□□ 0.18
COL17A1-202ENST00000369733 RNF157Q96PX1 679 aa16.21■□□□□ 0.18
COL17A1-202ENST00000369733 CLUHO75153 1309 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 A0A087WZ62 844 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 HDAC3O15379 428 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 CRTAMO95727 393 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 JAM2P57087 298 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 ANGEL2Q5VTE6 544 aaKnown RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 ZNF276Q8N554 614 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 NAT14Q8WUY8 206 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 FDXACB1Q9BRP7 624 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 TMCO1Q9UM00 188 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 PCDHB8Q9UN66 801 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 CAPN8A6NHC0 703 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 EFCAB14O75071 495 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 LGR5O75473 907 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 ITGA2BP08514 1039 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 FGRP09769 529 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 NELFEP18615 380 aaKnown RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 GALK1P51570 392 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 PERM1Q5SV97 790 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 UNC5AQ6ZN44 842 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 C19orf18Q8NEA5 215 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 TRIM63Q969Q1 353 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 PSMD13Q9UNM6 376 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 RAP2CQ9Y3L5 183 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 HBS1LQ9Y450 684 aaKnown RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 MZF1P28698 734 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 MGAT5BQ3V5L5 792 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 FAM228AQ86W67 206 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 KBTBD2Q8IY47 623 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 DEFB106AQ8N104 65 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 TMEM161BQ8NDZ6 487 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 L3MBTL3Q96JM7 780 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 RTKNQ9BST9 563 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 MAP3K13O43283 966 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 SYNCRIPO60506 623 aaKnown RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 IMPDH2P12268 514 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 JAK1P23458 1154 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 EPHA3P29320 983 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 HARS2P49590 506 aaKnown RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 CCNG1P51959 295 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 YWHAZP63104 245 aaKnown RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 GPR162Q16538 588 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 SLC41A1Q8IVJ1 513 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 UTP15Q8TED0 518 aaKnown RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 TRPC4APQ8TEL6 797 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 EZH1Q92800 747 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 DEFB129Q9H1M3 183 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 IKZF4Q9H2S9 585 aa16.2■□□□□ 0.18
COL17A1-202ENST00000369733 ABI2Q9NYB9 513 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 MTF2Q9Y483 593 aaPredicted RBP16.2■□□□□ 0.18
COL17A1-202ENST00000369733 YY1P25490 414 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 ST13P50502 369 aaKnown RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 SFSWAPQ12872 951 aaKnown RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 RAD21L1Q9H4I0 556 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 SFMBT1Q9UHJ3 866 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 TMCC3Q9ULS5 477 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 LACTBL1A8MY62 500 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 DGCR6Q14129 220 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 ARHGEF7Q14155 803 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 SPANXN2Q5MJ10 180 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 ANKS6Q68DC2 871 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms