RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 USH1CQ9Y6N9 552 aa13.52□□□□□ -0.25
SQSTM1-201ENST00000360718 DOCK6Q96HP0 2047 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 FAM72CH0Y354 149 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 EEF2KO00418 725 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 TGM5O43548 720 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 SLC2A3P11169 496 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 CCNB1P14635 433 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 GOT1P17174 413 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 FOXN2P32314 431 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 IRS1P35568 1242 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 EIF3EP60228 445 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 FAM72AQ5TYM5 149 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 SLC9A4Q6AI14 798 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 FAM72DQ6L9T8 149 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 ASRGL1Q7L266 308 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 FAM72BQ86X60 149 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 PLD5Q8N7P1 536 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 SLC35B2Q8TB61 432 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 RSRC1Q96IZ7 334 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 CDK5RAP1Q96SZ6 601 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 ENTPD7Q9NQZ7 604 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 LZTS1Q9Y250 596 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 HEY1Q9Y5J3 304 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 REV3LO60673 3130 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 SHROOM3Q8TF72 1996 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 SGK1O00141 431 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 GRM6O15303 877 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 KIF1CO43896 1103 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 DCTN3O75935 186 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 ADH1AP07327 375 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 ZDHHC11BP0C7U3 371 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 EPHB3P54753 998 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 WDR4P57081 412 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 TWF1Q12792 350 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 PLD1Q13393 1074 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 PPP2R5DQ14738 602 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 C10orf120Q5SQS8 335 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 RNASEH2BQ5TBB1 312 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 PLPP4Q5VZY2 271 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 C1orf228Q6PIY5 440 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 NPNTQ6UXI9 565 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 BZW1Q7L1Q6 419 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 PRUNE1Q86TP1 453 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 TCEAL8Q8IYN2 117 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 LRRC8CQ8TDW0 803 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 DENND1AQ8TEH3 1009 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 RSAD2Q8WXG1 361 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 OVCA2Q8WZ82 227 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 ZNF512Q96ME7 567 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 KLHL5Q96PQ7 755 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 EPAS1Q99814 870 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 EMILIN2Q9BXX0 1053 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 EBF2Q9HAK2 575 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 NOP53Q9NZM5 478 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 FETUBQ9UGM5 382 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 PHTF1Q9UMS5 762 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 MFHAS1Q9Y4C4 1052 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 INSL5Q9Y5Q6 135 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 OBSL1O75147 1896 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 DOCK4Q8N1I0 1966 aa13.51□□□□□ -0.25
SQSTM1-201ENST00000360718 ATG2AQ2TAZ0 1938 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 C2orf71A6NGG8 1288 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 C5orf67F2Z3F1 127 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 SMAPO00193 183 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 LPXNO60711 386 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 SPAG7O75391 227 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 UNC5CO95185 931 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 RBP3P10745 1247 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 MSH2P43246 934 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 NR2C2P49116 596 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 TPI1P60174 286 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 EFEMP1Q12805 493 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 NOMO1Q15155 1222 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 OASLQ15646 514 aaKnown RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 PDK4Q16654 411 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 HHATQ5VTY9 493 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 CGB2Q6NT52 195 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 LILRA6Q6PI73 481 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 ZBED8Q8IZ13 594 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 RMDN2Q96LZ7 410 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 CCSER2Q9H7U1 834 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 SSU72Q9NP77 194 aaKnown RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 PSMC3IPQ9P2W1 217 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 TLR6Q9Y2C9 796 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 H7C0C1 242 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 ZSCAN5DPP0CG00 497 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 AMPD1P23109 780 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 GCAP28676 217 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 ATP5OP48047 213 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 HCAR3P49019 387 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 PDIA2Q13087 525 aaKnown RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 FAM182AQ5T1J6 154 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 DARS2Q6PI48 645 aaKnown RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 FAM47EQ6ZV65 393 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 MRPL43Q8N983 215 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms