RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 SMARCD1Q96GM5 515 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 C12orf42Q96LP6 360 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 TRIM15Q9C019 465 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 NKX1-2Q9UD57 310 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 ACTL7BQ9Y614 415 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 SLC15A5A6NIM6 579 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 PAPSS1O43252 624 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 LYPLA1O75608 230 aaPredicted RBP13.79□□□□□ -0.2
TMEM248-201ENST00000341567 THRAP10827 490 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 OR1E1P30953 314 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 FDFT1P37268 417 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 CDH18Q13634 790 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 CLEC4FQ8N1N0 589 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 MAGEC3Q8TD91 643 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 TRIM62Q9BVG3 475 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 R3HDMLQ9H3Y0 253 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 TCF7L2Q9NQB0 619 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 THAP1Q9NVV9 213 aa13.79□□□□□ -0.2
TMEM248-201ENST00000341567 DPYSL4O14531 572 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 MGEA5O60502 916 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 C22orf31O95567 290 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 GDF10P55107 478 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 CARNMT1Q8N4J0 409 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 PIF1Q9H611 641 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 TBC1D23Q9NUY8 699 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 TMEM59LQ9UK28 342 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 SLC12A4Q9UP95 1085 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 ERI2A8K979 691 aaKnown RBP13.78□□□□□ -0.2
TMEM248-201ENST00000341567 AHCYL1O43865 530 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 HOXC6P09630 235 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 GRM5P41594 1212 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 PCYT1AP49585 367 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 CLCNKBP51801 687 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 PTK2BQ14289 1009 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 C16orf72Q14CZ0 275 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 RBBP7Q16576 425 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 PARP6Q2NL67 630 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 SPRYD7Q5W111 196 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 MARK4Q96L34 752 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 COLEC11Q9BWP8 271 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 EFCAB1Q9HAE3 211 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 CDHR5Q9HBB8 845 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 PCDH18Q9HCL0 1135 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 MRPL40Q9NQ50 206 aaKnown RBP13.78□□□□□ -0.2
TMEM248-201ENST00000341567 CRYL1Q9Y2S2 319 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 TCRBV9S1A1TA0A576 114 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 MBL2P11226 248 aaPredicted RBP13.78□□□□□ -0.2
TMEM248-201ENST00000341567 UNGP13051 313 aaPredicted RBP13.78□□□□□ -0.2
TMEM248-201ENST00000341567 NOS2P35228 1153 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 MRPS6P82932 125 aaKnown RBP13.78□□□□□ -0.2
TMEM248-201ENST00000341567 PPIDQ08752 370 aaKnown RBP13.78□□□□□ -0.2
TMEM248-201ENST00000341567 SEL1L3Q68CR1 1132 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 ELMOD1Q8N336 334 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
TMEM248-201ENST00000341567 MYLPFQ96A32 169 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 COQ4Q9Y3A0 265 aa13.78□□□□□ -0.2
TMEM248-201ENST00000341567 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 PRR23AA6NEV1 266 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 SUPT3HB4E1H0 165 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 TPBGLP0DKB5 382 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 AKT1P31749 480 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 SKIV2L2P42285 1042 aaKnown RBP13.77□□□□□ -0.2
TMEM248-201ENST00000341567 IMPG1Q17R60 797 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 TAS1R3Q7RTX0 852 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 ULK2Q8IYT8 1036 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 RBM15BQ8NDT2 890 aaKnown RBP13.77□□□□□ -0.2
TMEM248-201ENST00000341567 FIZ1Q96SL8 496 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 ZNF229Q9UJW7 825 aa13.77□□□□□ -0.2
TMEM248-201ENST00000341567 ZMYND8Q9ULU4 1186 aaPredicted RBP13.77□□□□□ -0.2
TMEM248-201ENST00000341567 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ALADP13716 330 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 TBX4P57082 545 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 DAB2P98082 770 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 UGP2Q16851 508 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 MARC1Q5VT66 337 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ZNF470Q6ECI4 717 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 TMC7Q7Z402 723 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 DDX53Q86TM3 631 aaKnown RBP13.77□□□□□ -0.21
TMEM248-201ENST00000341567 TNS4Q8IZW8 715 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ACSS3Q9H6R3 686 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 LMCD1Q9NZU5 365 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 STXBP5LQ9Y2K9 1186 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 AK5Q9Y6K8 562 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 CITO14578 2027 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
TMEM248-201ENST00000341567 F5H5T6 163 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ALOX15BO15296 676 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 STX7O15400 261 aaKnown RBP13.77□□□□□ -0.21
TMEM248-201ENST00000341567 KDM1AO60341 852 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ANXA9O76027 345 aa13.77□□□□□ -0.21
TMEM248-201ENST00000341567 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
TMEM248-201ENST00000341567 CAPRIN1Q14444 709 aaKnown RBP13.77□□□□□ -0.21
TMEM248-201ENST00000341567 LBRQ14739 615 aaKnown RBP13.77□□□□□ -0.21
TMEM248-201ENST00000341567 TBCCQ15814 346 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms