RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 POU5F1Q01860 360 aaKnown RBP17.93■□□□□ 0.46
SYDE2-202ENST00000341460 TNK2Q07912 1038 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 MACC1Q6ZN28 852 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 VN1R5Q7Z5H4 357 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 CREG2Q8IUH2 290 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 ZNF540Q8NDQ6 660 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 HPDLQ96IR7 371 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 ACAT2Q9BWD1 397 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 SPATA31A1Q5TZJ5 1347 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 UPP2O95045 317 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 GMPSP49915 693 aaPredicted RBP17.93■□□□□ 0.46
SYDE2-202ENST00000341460 KPNA1P52294 538 aaPredicted RBP17.93■□□□□ 0.46
SYDE2-202ENST00000341460 BST2Q10589 180 aaKnown RBP17.93■□□□□ 0.46
SYDE2-202ENST00000341460 BHLHB9Q6PI77 547 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 IPMKQ8NFU5 416 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 TCF12Q99081 682 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 RNF112Q9ULX5 631 aa17.93■□□□□ 0.46
SYDE2-202ENST00000341460 CPT1AP50416 773 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 RBM20Q5T481 1227 aaKnown RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 PTRHD1Q6GMV3 140 aaKnown RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 ACTRT2Q8TDY3 377 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 TMEM39BQ9GZU3 492 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 EME2A4GXA9 379 aaPredicted RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 SLC25A24Q6NUK1 477 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 UBA3Q8TBC4 463 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 CCNB1IP1Q9NPC3 277 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 CHST12Q9NRB3 414 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 CCL15-CCL14A0A0B4J2E2 113 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 APOL3O95236 402 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 MAGEA2P43356 314 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 CCL15Q16663 113 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 CLEC16AQ2KHT3 1053 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 ZIK1Q3SY52 487 aaPredicted RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 SLC22A9Q8IVM8 553 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 MINDY2Q8NBR6 621 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 SPPL2AQ8TCT8 520 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 VPS45Q9NRW7 570 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 BCLAF3A2AJT9 711 aaKnown RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 MPOP05164 745 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 ANXA11P50995 505 aaKnown RBP17.92■□□□□ 0.46
SYDE2-202ENST00000341460 ENPEPQ07075 957 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 STRA8Q7Z7C7 330 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 ADCY4Q8NFM4 1077 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 ARHGAP20Q9P2F6 1191 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 NUP50Q9UKX7 468 aa17.92■□□□□ 0.46
SYDE2-202ENST00000341460 FAM240BA0A1B0GVZ2 78 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PSMD11O00231 422 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 GRIN3BO60391 1043 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 CNPP09543 421 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TCF4P15884 667 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 OR1G1P47890 313 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 FAM47BQ8NA70 645 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 DAGLBQ8NCG7 672 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 SLITRK2Q9H156 845 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 DEFB129Q9H1M3 183 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 LRRC40Q9H9A6 602 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PREBQ9HCU5 417 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 IRF1P10914 325 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 FDPSP14324 419 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 CHI3L1P36222 383 aaPredicted RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 NAMPTP43490 491 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 HARS2P49590 506 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TAF6P49848 677 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 ATG4CQ96DT6 458 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 CCDC115Q96NT0 180 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 EPB41L4BQ9H329 900 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 ARHGEF33A8MVX0 844 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 GRIA3P42263 894 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PHKG1Q16816 387 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PGS1Q32NB8 556 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 MAB21L3Q8N8X9 362 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TFB1MQ8WVM0 346 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 MTMR8Q96EF0 704 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PTCD3Q96EY7 689 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 YIPF2Q9BWQ6 316 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TLR10Q9BXR5 811 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 SENP2Q9HC62 589 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 WWOXQ9NZC7 414 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 RAB26Q9ULW5 256 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TBX20Q9UMR3 447 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TRIM38O00635 465 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 MGRN1O60291 552 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PAICSP22234 425 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 RPA3P35244 121 aaPredicted RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TWF1Q12792 350 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 TFDP3Q5H9I0 405 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 CRTC3Q6UUV7 619 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PQLC1Q8N2U9 271 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 ZNF285Q96NJ3 590 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 CCDC167Q9P0B6 97 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 CHRM3P20309 590 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PROSER1Q86XN7 944 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 ANKRD13AQ8IZ07 590 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 PCDH20Q8N6Y1 951 aaKnown RBP17.91■□□□□ 0.46
SYDE2-202ENST00000341460 AGBL3Q8NEM8 1001 aa17.91■□□□□ 0.46
SYDE2-202ENST00000341460 EEF1AKMT1Q8WVE0 214 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms