RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 KCNK1O00180 336 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 MATN3O15232 486 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 MAFKO60675 156 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 CSH1P0DML2 217 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 CSH2P0DML3 217 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 BRAFP15056 766 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 DNAJB2P25686 324 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 TUBP50607 506 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 NDST2P52849 883 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 TNK2Q07912 1038 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 EFEMP1Q12805 493 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 ZBTB17Q13105 803 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
LMO1-201ENST00000335790 SKIDA1Q1XH10 827 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 MS4A13Q5J8X5 152 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 TTC19Q6DKK2 380 aaPredicted RBP13.82□□□□□ -0.2
LMO1-201ENST00000335790 NECAB2Q7Z6G3 386 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 TMEM199Q8N511 208 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 PDCD7Q8N8D1 485 aaKnown RBP13.82□□□□□ -0.2
LMO1-201ENST00000335790 MDM1Q8TC05 714 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 ARNTL2Q8WYA1 636 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 TMEM169Q96HH4 297 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 PPP1R2P1Q96PQ5 205 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 SELENOSQ9BQE4 189 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 SLC39A8Q9C0K1 460 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 CASS4Q9NQ75 786 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 INTS9Q9NV88 658 aaKnown RBP13.82□□□□□ -0.2
LMO1-201ENST00000335790 MOCS1Q9NZB8 636 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 SPG21Q9NZD8 308 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
LMO1-201ENST00000335790 ZNF212Q9UDV6 495 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
LMO1-201ENST00000335790 NUDT5Q9UKK9 219 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 PCDHA11Q9Y5I1 949 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 PLXNA4Q9HCM2 1894 aa13.82□□□□□ -0.2
LMO1-201ENST00000335790 OBSL1O75147 1896 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 TMEM120BA0PK00 339 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 SDR42E2A6NKP2 422 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 FAM159BA6NKW6 160 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 RASA4BC9J798 803 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 AP3B1O00203 1094 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 ZBTB24O43167 697 aaPredicted RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 RASA4O43374 803 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 FAM107AO95990 144 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 CPP00450 1065 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 SRGAP2BP0DMP2 458 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 CSF2RAP15509 400 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 CREB1P16220 341 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 HMGA1P17096 107 aaKnown RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 GRIA1P42261 906 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 MSH2P43246 934 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 TMED2Q15363 201 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 C10orf120Q5SQS8 335 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 KIAA1841Q6NSI8 718 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 TIGD7Q6NT04 549 aaPredicted RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 RWDD4Q6NW29 188 aaKnown RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 UNC5AQ6ZN44 842 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 NETO2Q8NC67 525 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 GSDMBQ8TAX9 411 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 BCAS4Q8TDM0 211 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 AZIN2Q96A70 460 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 SGSM3Q96HU1 749 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 ZNF317Q96PQ6 595 aaPredicted RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 ZYG11BQ9C0D3 744 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 NOL6Q9H6R4 1146 aaKnown RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 IL23AQ9NPF7 189 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 SEPT10Q9P0V9 454 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 TBK1Q9UHD2 729 aa13.81□□□□□ -0.2
LMO1-201ENST00000335790 SMG5Q9UPR3 1016 aaKnown RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
LMO1-201ENST00000335790 TYROBPO43914 113 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 TLR5O60602 858 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 LILRB3O75022 631 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 SEC24AO95486 1093 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 PPM1AP35813 382 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 PPP3CCP48454 512 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 HTRA4P83105 476 aaPredicted RBP13.8□□□□□ -0.2
LMO1-201ENST00000335790 NAB1Q13506 487 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 MPP2Q14168 576 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 BTG3Q14201 252 aaPredicted RBP13.8□□□□□ -0.2
LMO1-201ENST00000335790 EFTUD2Q15029 972 aaKnown RBP eCLIP13.8□□□□□ -0.2
LMO1-201ENST00000335790 KBTBD12Q3ZCT8 623 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 FAM182AQ5T1J6 154 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 SRRM1Q8IYB3 904 aaKnown RBP13.8□□□□□ -0.2
LMO1-201ENST00000335790 TCEAL8Q8IYN2 117 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 ATPAF2Q8N5M1 289 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 CNTD1Q8N815 330 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 GIPC2Q8TF65 315 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 TTC17Q96AE7 1141 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 ALKBH8Q96BT7 664 aaKnown RBP13.8□□□□□ -0.2
LMO1-201ENST00000335790 STAMBPL1Q96FJ0 436 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 CELF6Q96J87 481 aaKnown RBP13.8□□□□□ -0.2
LMO1-201ENST00000335790 FCRL5Q96RD9 977 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 CCT8L2Q96SF2 557 aa13.8□□□□□ -0.2
LMO1-201ENST00000335790 MLPHQ9BV36 600 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms