RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 INPP4AQ96PE3 977 aaPredicted RBP3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 RETREG1Q9H6L5 497 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 CATSPERBQ9H7T0 1116 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 DDX31Q9H8H2 851 aaKnown RBP3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 PNRC2Q9NPJ4 139 aaKnown RBP3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 FBXO28Q9NVF7 368 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 WDR81Q562E7 1941 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 LCKP06239 509 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 CHRNB2P17787 502 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 IGFBP2P18065 325 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 ZP1P60852 638 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 MAPKAPK3Q16644 382 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 DUSP6Q16828 381 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 ALG10Q5BKT4 473 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 ALG10BQ5I7T1 473 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 HIST2H2BCQ6DN03 193 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 C8orf82Q6P1X6 216 aaPredicted RBP3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 WDR93Q6P2C0 686 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 MEX3BQ6ZN04 569 aaKnown RBP3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 H1FNTQ75WM6 255 aaPredicted RBP3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 ZNF367Q7RTV3 350 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 MDGA2Q7Z553 956 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 SLC25A41Q8N5S1 370 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 ADPRHL1Q8NDY3 354 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 RTP4Q96DX8 246 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 FAR2Q96K12 515 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 APOLD1Q96LR9 279 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 SFXN1Q9H9B4 322 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 FSCN3Q9NQT6 498 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 RGL1Q9NZL6 768 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 FBXO4Q9UKT5 387 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 CA14Q9ULX7 337 aa3.37□□□□□ -1.87
CBX3P1-201ENST00000325243 LMTK3Q96Q04 1460 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 KPNA5O15131 536 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 MSI1O43347 362 aaKnown RBP3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 LIASO43766 372 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 PQBP1O60828 265 aaKnown RBP3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 IGLV2-11P01706 119 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 ALDOCP09972 364 aaKnown RBP3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 GRSF1Q12849 480 aaKnown RBP eCLIP3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 TRAF3Q13114 568 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 CSHL1Q14406 222 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 HNF4GQ14541 408 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 TDRD12Q587J7 1177 aaKnown RBP3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 C10orf76Q5T2E6 689 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 WBP2NLQ6ICG8 309 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 C14orf80Q86SX3 495 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 FAM217AQ8IXS0 508 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 CCDC33Q8N5R6 958 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 SLC22A17Q8WUG5 538 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 TMED6Q8WW62 240 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 HES6Q96HZ4 224 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 ADAD1Q96M93 576 aaKnown RBP3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 NODALQ96S42 347 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 OSBPL5Q9H0X9 879 aaPredicted RBP3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 SDF2L1Q9HCN8 221 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 ZNF304Q9HCX3 659 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 TNFSF13BQ9Y275 285 aa3.36□□□□□ -1.87
CBX3P1-201ENST00000325243 LOC102724159A0A0B4J2E5 919 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 APOL1O14791 398 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 NKX2-8O15522 239 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 KRT36O76013 467 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 NDST3O95803 873 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 SP1P08047 785 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 ITGA5P08648 1049 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 SRGAP2BP0DMP2 458 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 PEPDP12955 493 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 TNFSF8P32971 234 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 PWP2Q15269 919 aaKnown RBP3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 ZRSR1Q15695 479 aaKnown RBP3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 FSCBQ5H9T9 825 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 TTC30AQ86WT1 665 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 RASGRP3Q8IV61 690 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 GLIS1Q8NBF1 620 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 TSR2Q969E8 191 aaKnown RBP3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 MCRS1Q96EZ8 462 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 PKP4Q99569 1192 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 B3GNT4Q9C0J1 378 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 TCF7L2Q9NQB0 619 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 HELLSQ9NRZ9 838 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 RNF146Q9NTX7 359 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 MAN2B2Q9Y2E5 1009 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 DTNAQ9Y4J8 743 aa3.35□□□□□ -1.87
CBX3P1-201ENST00000325243 LOC105369274A0A096LPK9 316 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 TRBV5-7A0A0A0MS05 114 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 LOC102723532A0A0G2JNH3 316 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 PNMA6EA0A0J9YXQ4 647 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 PRR23AA6NEV1 266 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 C3orf70A6NLC5 250 aaPredicted RBP3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 KCNJ18B7U540 433 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 MS4A18H0YCH9 400 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 J3KTA2 159 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 M0QYT0 321 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 BUB3O43684 328 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 TAF5LO75529 589 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 SNRNP70P08621 437 aaKnown RBP3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 SLC16A2P36021 539 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 STT3AP46977 705 aa3.34□□□□□ -1.87
CBX3P1-201ENST00000325243 POU3F1Q03052 451 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms