RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 PARVBQ9HBI1 364 aa10.09□□□□□ -0.79
TMOD3-201ENST00000308580 GIMAP4Q9NUV9 329 aa10.09□□□□□ -0.79
TMOD3-201ENST00000308580 POLG2Q9UHN1 485 aa10.09□□□□□ -0.79
TMOD3-201ENST00000308580 ANKRD6Q9Y2G4 727 aa10.09□□□□□ -0.79
TMOD3-201ENST00000308580 C3P01024 1663 aa10.09□□□□□ -0.79
TMOD3-201ENST00000308580 CLDN5O00501 218 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 AVILO75366 819 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CST3P01034 146 aaPredicted RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 RANBP1P43487 201 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 PRKAA2P54646 552 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 HPCAP84074 193 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CCDC15Q0P6D6 951 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 PCID2Q5JVF3 399 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 RASGEF1CQ8N431 466 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 GPR20Q99678 358 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 POLR1EQ9GZS1 481 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 RNPEPQ9H4A4 650 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 NXF3Q9H4D5 531 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 SEPT3Q9UH03 358 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 SFMBT1Q9UHJ3 866 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 STARD13Q9Y3M8 1113 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 IGKV6D-41A0A0C4DH26 115 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 TCRBV7S2A1N4TA0A589 114 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 SCAMP3O14828 347 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ALOX15BO15296 676 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ZNF682O95780 498 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CLK2P49760 499 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 TBCELQ5QJ74 424 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 OLFML2BQ68BL8 750 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 POMKQ9H5K3 350 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 IMPAD1Q9NX62 359 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 DOLKQ9UPQ8 538 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 FAM50BQ9Y247 325 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 MGAT4DA6NG13 374 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 BTN3A1O00481 513 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 KRT6AP02538 564 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 KRT6BP04259 564 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CYP1A1P04798 512 aaPredicted RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 KRT6CP48668 564 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 TUFMP49411 452 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 MRPS6P82932 125 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CAMK2GQ13555 558 aaPredicted RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 TJAP1Q5JTD0 557 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 LBX2Q6XYB7 198 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 C16orf59Q7L2K0 433 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ITIH5Q86UX2 942 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 FAM9CQ8IZT9 166 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CPXM1Q96SM3 734 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 SEPHS2Q99611 448 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 B3GNT5Q9BYG0 378 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 PRDM16Q9HAZ2 1276 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ARHGAP28Q9P2N2 729 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CDH9Q9ULB4 789 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 DRD4P21917 467 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 FMO4P31512 558 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 TRPC1P48995 793 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 OASLQ15646 514 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 LRRC52Q8N7C0 313 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 FNDC5Q8NAU1 212 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 FAM120BQ96EK7 910 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 EBNA1BP2Q99848 306 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 MRPL45Q9BRJ2 306 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 LCA5LO95447 670 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CYP2C18P33260 490 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 RAP1GAP2Q684P5 730 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 PLEKHA7Q6IQ23 1121 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 C11orf74Q86VG3 221 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 GFM2Q969S9 779 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 C18orf25Q96B23 403 aaPredicted RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 YIPF2Q9BWQ6 316 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 TBC1D23Q9NUY8 699 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 NID2Q14112 1375 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 MYO5BQ9ULV0 1848 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ELF3P78545 371 aaPredicted RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 MAP2K5Q13163 448 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 BOP1Q14137 746 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 PDK4Q16654 411 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 CYP2R1Q6VVX0 501 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 BBS7Q8IWZ6 715 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 MRPL9Q9BYD2 267 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 PLA2G4CQ9UP65 541 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 NDUFAF1Q9Y375 327 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 FGF10O15520 208 aaPredicted RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ZNF862O60290 1169 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 SYNCRIPO60506 623 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 HOXC6P09630 235 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 MATKP42679 507 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 RPL14P50914 215 aaKnown RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 PWP1Q13610 501 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 DNAJC14Q6Y2X3 702 aaPredicted RBP10.08□□□□□ -0.8
TMOD3-201ENST00000308580 LRRC8DQ7L1W4 858 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 SIKE1Q9BRV8 207 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 DPY30Q9C005 99 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ST3GAL5Q9UNP4 418 aa10.08□□□□□ -0.8
TMOD3-201ENST00000308580 ERBB2P04626 1255 aa10.07□□□□□ -0.8
TMOD3-201ENST00000308580 ME2P23368 584 aa10.07□□□□□ -0.8
TMOD3-201ENST00000308580 S100A5P33763 92 aa10.07□□□□□ -0.8
TMOD3-201ENST00000308580 GPC1P35052 558 aa10.07□□□□□ -0.8
TMOD3-201ENST00000308580 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
TMOD3-201ENST00000308580 LENG9Q96B70 501 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms