RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PRRT4C9JH25 899 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 K7EQS6 105 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 CHRNB1P11230 501 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 ERCC2P18074 760 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 CTNNA1P35221 906 aaKnown RBP25.14■■□□□ 1.62
HOXC9-201ENST00000303450 CSKP41240 450 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 DPYSQ14117 519 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 FBXO43Q4G163 708 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 RNF219Q5W0B1 726 aaPredicted RBP25.14■■□□□ 1.62
HOXC9-201ENST00000303450 KIAA0907Q7Z7F0 614 aaPredicted RBP25.14■■□□□ 1.62
HOXC9-201ENST00000303450 KRT35Q92764 455 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 EZH1Q92800 747 aaPredicted RBP25.14■■□□□ 1.62
HOXC9-201ENST00000303450 PBXIP1Q96AQ6 731 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 ZNF670Q9BS34 389 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 MUC3BQ9H195 1237 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 RBM12Q9NTZ6 932 aaKnown RBP25.14■■□□□ 1.62
HOXC9-201ENST00000303450 NDFIP2Q9NV92 336 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 PCDHA3Q9Y5H8 950 aa25.14■■□□□ 1.62
HOXC9-201ENST00000303450 MARCKSL1P49006 195 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 MMRN1Q13201 1228 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 DMC1Q14565 340 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 CWF19L1Q69YN2 538 aaKnown RBP25.13■■□□□ 1.61
HOXC9-201ENST00000303450 KATNAL2Q8IYT4 538 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 TRIM58Q8NG06 486 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 OR52K2Q8NGK3 314 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 CCDC26Q8TAB7 109 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 RNF25Q96BH1 459 aaPredicted RBP25.13■■□□□ 1.61
HOXC9-201ENST00000303450 FEM1AQ9BSK4 669 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 CIPCQ9C0C6 399 aa25.13■■□□□ 1.61
HOXC9-201ENST00000303450 ILVBLA1L0T0 632 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 TIMM44O43615 452 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 POLR2EP19388 210 aaKnown RBP25.12■■□□□ 1.61
HOXC9-201ENST00000303450 AMPD1P23109 780 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 IL4RP24394 825 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 CTNNA2P26232 953 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 MZF1P28698 734 aaPredicted RBP25.12■■□□□ 1.61
HOXC9-201ENST00000303450 SEC13P55735 322 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 EIF4HQ15056 248 aaKnown RBP25.12■■□□□ 1.61
HOXC9-201ENST00000303450 PLEKHG6Q3KR16 790 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 FUT11Q495W5 492 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 PITRM1Q5JRX3 1037 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 MBLAC2Q68D91 279 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 ZNF783Q6ZMS7 281 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 ADIPOR2Q86V24 386 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 CCDC105Q8IYK2 499 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 SYNPOQ8N3V7 929 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 UBL4BQ8N7F7 174 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 UCMAQ8WVF2 138 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 ELOVL2Q9NXB9 296 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 VPS28Q9UK41 221 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 ATG2BQ96BY7 2078 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 GOLGA6L9A6NEM1 432 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 MIF4GDA9UHW6 222 aaKnown RBP25.12■■□□□ 1.61
HOXC9-201ENST00000303450 RAMP2O60895 175 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 ZRANB2O95218 330 aaKnown RBP eCLIP25.12■■□□□ 1.61
HOXC9-201ENST00000303450 GNA12Q03113 381 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 ANKRD20A8PQ5CZ79 823 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 TMEM215Q68D42 235 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 APCDD1Q8J025 514 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 INTS6Q9UL03 887 aaKnown RBP25.12■■□□□ 1.61
HOXC9-201ENST00000303450 PACSIN2Q9UNF0 486 aaPredicted RBP25.12■■□□□ 1.61
HOXC9-201ENST00000303450 STARD13Q9Y3M8 1113 aa25.12■■□□□ 1.61
HOXC9-201ENST00000303450 A0A0D9SEW6 157 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 RNF40O75150 1001 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 NUMBP49757 651 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 PLK1P53350 603 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 FZD5Q13467 585 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 TMCO3Q6UWJ1 677 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 BMP8AQ7Z5Y6 402 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 VSIG1Q86XK7 387 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 RCOR2Q8IZ40 523 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 EXD1Q8NHP7 514 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 UBE2Q2Q8WVN8 375 aa25.11■■□□□ 1.61
HOXC9-201ENST00000303450 RBM41Q96IZ5 413 aaKnown RBP25.11■■□□□ 1.61
HOXC9-201ENST00000303450 MAK16Q9BXY0 300 aaKnown RBP25.11■■□□□ 1.61
HOXC9-201ENST00000303450 C3orf70A6NLC5 250 aaPredicted RBP25.1■■□□□ 1.61
HOXC9-201ENST00000303450 USP27XA6NNY8 438 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 ATP5BP06576 529 aaKnown RBP25.1■■□□□ 1.61
HOXC9-201ENST00000303450 DCNP07585 359 aaKnown RBP25.1■■□□□ 1.61
HOXC9-201ENST00000303450 AOC1P19801 751 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 ETFBP38117 255 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 CLCN5P51795 746 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 RWDD2BP57060 319 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 POLD3Q15054 466 aaPredicted RBP25.1■■□□□ 1.61
HOXC9-201ENST00000303450 C2orf27AQ580R0 203 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 CCDC50Q8IVM0 306 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 UMODL1-AS1Q8N2C9 162 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 OR7D4Q8NG98 312 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 PCDH19Q8TAB3 1148 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 CLDN23Q96B33 292 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 FAF2Q96CS3 445 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 TRIM44Q96DX7 344 aaPredicted RBP25.1■■□□□ 1.61
HOXC9-201ENST00000303450 SPON2Q9BUD6 331 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 MAGEH1Q9H213 219 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 OR51B4Q9Y5P0 310 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 CUL9Q8IWT3 2517 aa25.1■■□□□ 1.61
HOXC9-201ENST00000303450 MYO18AQ92614 2054 aaKnown RBP25.1■■□□□ 1.61
HOXC9-201ENST00000303450 FAM86C2PA6NEL3 165 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 ZNF487B1APH4 448 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 DCLK1O15075 740 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms