RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SLC6A3Q01959 620 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CDC16Q13042 620 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 NDUFA5Q16718 116 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TDRD10Q5VZ19 366 aaKnown RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CES3Q6UWW8 571 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CASP12Q6UXS9 341 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 C1orf186Q6ZWK4 172 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 NANOGNBQ7Z5D8 188 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 NECAB2Q7Z6G3 386 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TMEM132CQ8N3T6 1108 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 TTC30BQ8N4P2 665 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 UBASH3BQ8TF42 649 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 SEMA4DQ92854 862 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 FAM136AQ96C01 138 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ZDHHC15Q96MV8 337 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 PXMP2Q9NR77 195 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ARL8BQ9NVJ2 186 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 CRNNQ9UBG3 495 aaPredicted RBP11.23□□□□□ -0.61
PBRM1-201ENST00000296302 IPPQ9Y573 584 aa11.23□□□□□ -0.61
PBRM1-201ENST00000296302 ASTN1O14525 1302 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 TK2O00142 265 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CYB561D2O14569 222 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CYP3A4P08684 503 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SP100P23497 879 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 FLT3P36888 993 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CAP2P40123 477 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 NDST1P52848 882 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 VPS72Q15906 364 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 MARC1Q5VT66 337 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 KLHL17Q6TDP4 642 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 BBS12Q6ZW61 710 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 TXNRD3Q86VQ6 643 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 GLIS3Q8NEA6 775 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 RDH11Q8TC12 318 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 METTL6Q8TCB7 284 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 FAM45AQ8TCE6 357 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SHC3Q92529 594 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 HPS4Q9NQG7 708 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 FBXO6Q9NRD1 293 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 C3orf18Q9UK00 162 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 DEPDC5O75140 1603 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 A0A0A0MRY4 1105 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 RNF225M0QZC1 329 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 LHX1P48742 406 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 RENBPP51606 427 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CLCN3P51790 818 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 MTTPP55157 894 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 OXCT1P55809 520 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 INO80DQ53TQ3 878 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 POLNQ7Z5Q5 900 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 KRT78Q8N1N4 520 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 B3GALNT2Q8NCR0 500 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SPATA13Q96N96 652 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 ADGRE3Q9BY15 652 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CEP41Q9BYV8 373 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 UBXN6Q9BZV1 441 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 IL22Q9GZX6 179 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 ASB7Q9H672 318 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CDHR5Q9HBB8 845 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CHKBQ9Y259 395 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 HBS1LQ9Y450 684 aaKnown RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 DNM1LO00429 736 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 MAGEC1O60732 1142 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CXCL8P10145 99 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 ATP5F1P24539 256 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 TKTL1P51854 596 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 YWHAZP63104 245 aaKnown RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 DPYSQ14117 519 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 DGKKQ5KSL6 1271 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 PPP4R4Q6NUP7 873 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 ALYREFQ86V81 257 aaKnown RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 C11orf74Q86VG3 221 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 ECHDC2Q86YB7 292 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SYTL5Q8TDW5 730 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 KAT5Q92993 513 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 TRIM8Q9BZR9 551 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 S100A14Q9HCY8 104 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CLCA2Q9UQC9 943 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SH3GLB1Q9Y371 365 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 GNG14A0A1W2PPG7 69 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 AGPSO00116 658 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CAPN1P07384 714 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 CASP5P51878 434 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 FMO1Q01740 532 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 ITPK1Q13572 414 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 ZNF57Q68EA5 555 aaPredicted RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 PIWIL4Q7Z3Z4 852 aaKnown RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 POP5Q969H6 163 aaKnown RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 PURBQ96QR8 312 aaKnown RBP11.22□□□□□ -0.61
PBRM1-201ENST00000296302 TBL1YQ9BQ87 522 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 TMEM39BQ9GZU3 492 aa11.22□□□□□ -0.61
PBRM1-201ENST00000296302 KCNMB3Q9NPA1 279 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms