RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 DCDC2Q9UHG0 476 aa20.45■□□□□ 0.86
CXCL16-201ENST00000293778 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.45■□□□□ 0.86
CXCL16-201ENST00000293778 L3MBTL1Q9Y468 752 aa20.45■□□□□ 0.86
CXCL16-201ENST00000293778 FAM155AB1AL88 458 aaPredicted RBP20.44■□□□□ 0.86
CXCL16-201ENST00000293778 CA12O43570 354 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 TSPY1Q01534 308 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 FASTKD1Q53R41 847 aaKnown RBP20.44■□□□□ 0.86
CXCL16-201ENST00000293778 GRTP1Q5TC63 336 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 TMEM135Q86UB9 458 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 SCAMP5Q8TAC9 235 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 PPP1R14CQ8TAE6 165 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 PTCD3Q96EY7 689 aaKnown RBP20.44■□□□□ 0.86
CXCL16-201ENST00000293778 PRR11Q96HE9 360 aaPredicted RBP20.44■□□□□ 0.86
CXCL16-201ENST00000293778 NSL1Q96IY1 281 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 TEKT5Q96M29 485 aa20.44■□□□□ 0.86
CXCL16-201ENST00000293778 TDRD15B5MCY1 1934 aaKnown RBP20.43■□□□□ 0.86
CXCL16-201ENST00000293778 ARHGAP42A6NI28 874 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 FCHO1O14526 889 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 ITGB1P05556 798 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 CYP2C18P33260 490 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 RWDD4Q6NW29 188 aaKnown RBP20.43■□□□□ 0.86
CXCL16-201ENST00000293778 ZCCHC23Q6ZST2 131 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 BEND5Q7L4P6 421 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 SUSD3Q96L08 255 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 TLE6Q9H808 572 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 PLIN3O60664 434 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 USP1O94782 785 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 GSRP00390 522 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 JCHAINP01591 159 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 IGLV3-25P01717 112 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 SRGAP2BP0DMP2 458 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 COG7P83436 770 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 FAM13CQ8NE31 585 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 C20orf27Q9GZN8 174 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 SIK2Q9H0K1 926 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 THAP1Q9NVV9 213 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 NOD1Q9Y239 953 aa20.43■□□□□ 0.86
CXCL16-201ENST00000293778 CCDC22O60826 627 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 SKIP12755 728 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 TYK2P29597 1187 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 NPY2RP49146 381 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 CDK18Q07002 472 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 FRG1Q14331 258 aaKnown RBP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 KRT72Q14CN4 511 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ANKRD20A4Q4UJ75 823 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 CERCAMQ5T4B2 595 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 TTC7BQ86TV6 843 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ALYREFQ86V81 257 aaKnown RBP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 KLHDC9Q8NEP7 349 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 APOL2Q9BQE5 337 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 WWP1Q9H0M0 922 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ARHGEF38Q9NXL2 777 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 MARCOQ9UEW3 520 aaPredicted RBP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 HBS1LQ9Y450 684 aaKnown RBP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ZCWPW2A0A1B0GU75 182 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ARHGEF37A1IGU5 675 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 F8W810 466 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 IRAK2O43187 625 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ATP9BO43861 1147 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 KITP10721 976 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 CCND3P30281 292 aaPredicted RBP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 RPL10AP62906 217 aaKnown RBP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 PRKCZQ05513 592 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 PRPSAP1Q14558 356 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 FAM91A1Q658Y4 838 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 MBLAC2Q68D91 279 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 SPATA2LQ8IUW3 424 aaPredicted RBP20.42■□□□□ 0.86
CXCL16-201ENST00000293778 DPF3Q92784 378 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 RBBP8Q99708 897 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 NMUR2Q9GZQ4 415 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ABCC13Q9NSE7 274 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 ADAM28Q9UKQ2 775 aa20.42■□□□□ 0.86
CXCL16-201ENST00000293778 MAGEB16A2A368 324 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 TYMPP19971 482 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 SPRP35270 261 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 AQP5P55064 265 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 ZNF33AQ06730 810 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 EIF4EBP2Q13542 120 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 INSCQ1MX18 579 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 HSF5Q4G112 596 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 PPM1JQ5JR12 505 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 BTBD8Q5XKL5 378 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 CCSAPQ6IQ19 270 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 STRA8Q7Z7C7 330 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 ZSCAN18Q8TBC5 510 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 MIPEPQ99797 713 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 TRMT13Q9NUP7 481 aaKnown RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 MAGED2Q9UNF1 606 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 NEU3Q9UQ49 428 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 CALB2P22676 271 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 SLC5A3P53794 718 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 BRMS1LQ5PSV4 323 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 C4orf50Q6ZRC1 276 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 ZNF598Q86UK7 904 aaKnown RBP20.41■□□□□ 0.86
CXCL16-201ENST00000293778 BTBD10Q9BSF8 475 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 SNX15Q9NRS6 342 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 UBP1Q9NZI7 540 aa20.41■□□□□ 0.86
CXCL16-201ENST00000293778 DFFAO00273 331 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 PROCP04070 461 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms