RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CLEC4EQ9ULY5 219 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 ZNF510Q9Y2H8 683 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 ZNF487B1APH4 448 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 OTUD4Q01804 1114 aaKnown RBP28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 VSIG1Q86XK7 387 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 ACTL9Q8TC94 416 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 DDI1Q8WTU0 396 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 TMA16Q96EY4 203 aaKnown RBP28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 KLC2Q9H0B6 622 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 RBM12Q9NTZ6 932 aaKnown RBP28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 PPARGC1AQ9UBK2 798 aaKnown RBP28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 NUMBLQ9Y6R0 609 aa28.24■■■□□ 2.11
SMARCD3-201ENST00000262188 TFDP2Q14188 446 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 OTOP3Q7RTS5 596 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 HDXQ7Z353 690 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 ADGRG2Q8IZP9 1017 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 GIMAP7Q8NHV1 300 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 WFDC5Q8TCV5 224 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 DDX50Q9BQ39 737 aaKnown RBP28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 EBF3Q9H4W6 596 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 EFR3BQ9Y2G0 817 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 NUP205Q92621 2012 aa28.23■■■□□ 2.11
SMARCD3-201ENST00000262188 MRPS25P82663 173 aaKnown RBP28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 MTA1Q13330 715 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 C5orf22Q49AR2 442 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 RABGAP1LQ5R372 815 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 LY6G5CQ5SRR4 150 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 RTL3Q8N8U3 475 aaKnown RBP28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 TTC8Q8TAM2 541 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 CATSPERBQ9H7T0 1116 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 DTLQ9NZJ0 730 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 OTOL1A6NHN0 477 aaPredicted RBP28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 IL9P15248 144 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 RHOQP17081 205 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 CHKAP35790 457 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 PTCRAQ6ISU1 281 aaPredicted RBP28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 CPXM2Q8N436 756 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 OSCP1Q8WVF1 389 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 ACBD3Q9H3P7 528 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 NOL6Q9H6R4 1146 aaKnown RBP28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 EPS15L1Q9UBC2 864 aa28.22■■■□□ 2.11
SMARCD3-201ENST00000262188 H3BQF6 201 aa28.21■■■□□ 2.11
SMARCD3-201ENST00000262188 EML3Q32P44 896 aa28.21■■■□□ 2.11
SMARCD3-201ENST00000262188 LEXMQ3ZCV2 418 aa28.21■■■□□ 2.11
SMARCD3-201ENST00000262188 RHBDF2Q6PJF5 856 aa28.21■■■□□ 2.11
SMARCD3-201ENST00000262188 ZC3H18Q86VM9 953 aaKnown RBP28.21■■■□□ 2.11
SMARCD3-201ENST00000262188 CARNMT1Q8N4J0 409 aa28.21■■■□□ 2.11
SMARCD3-201ENST00000262188 SPATA4Q8NEY3 305 aa28.21■■■□□ 2.11
SMARCD3-201ENST00000262188 FGF10O15520 208 aaPredicted RBP28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 TUBBP07437 444 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 HOXD9P28356 352 aaPredicted RBP28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 HNRNPH1P31943 449 aaKnown RBP28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 KCNJ1P48048 391 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 ZNF135P52742 658 aaPredicted RBP28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 ANO4Q32M45 955 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 FSCBQ5H9T9 825 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 KLHL7Q8IXQ5 586 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 DEPDC1BQ8WUY9 529 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 P3H4Q92791 437 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 MIEF2Q96C03 454 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 DDX47Q9H0S4 455 aaKnown RBP28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 SPHK2Q9NRA0 654 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 TMEM248Q9NWD8 314 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 TBC1D14Q9P2M4 693 aa28.2■■■□□ 2.11
SMARCD3-201ENST00000262188 NEDD8-MDP1E9PL57 170 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 APOC4-APOC2K7ER74 178 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 APOC2P02655 101 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 OR1E1P30953 314 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 IFNAR2P48551 515 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 HTR4Q13639 388 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 PAFAH1B3Q15102 231 aaKnown RBP28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 SMAD2Q15796 467 aaKnown RBP28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 FYB2Q5VWT5 728 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 TTC27Q6P3X3 843 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 MFSD6LQ8IWD5 586 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 ARHGAP12Q8IWW6 846 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 HJURPQ8NCD3 748 aaPredicted RBP28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 IRF7Q92985 503 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 ELSPBP1Q96BH3 223 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 VPS18Q9P253 973 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 RNF14Q9UBS8 474 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 LIMD1Q9UGP4 676 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 DNPEPQ9ULA0 475 aa28.2■■■□□ 2.1
SMARCD3-201ENST00000262188 TTC36A6NLP5 189 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 HTR7P34969 479 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 ARHGAP36Q6ZRI8 547 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 NAP1L3Q99457 506 aaPredicted RBP28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 PHF7Q9BWX1 381 aaPredicted RBP28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 BBS2Q9BXC9 721 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 OBP2AQ9NY56 170 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 H0YHG0 523 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 CYP17A1P05093 508 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 TGM2P21980 687 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 SARNPP82979 210 aaKnown RBP28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 TUBB2AQ13885 445 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 ACBD5Q5T8D3 534 aaPredicted RBP28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 NAT16Q8N8M0 369 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 FAM210AQ96ND0 272 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 FAM83CQ9BQN1 747 aa28.19■■■□□ 2.1
SMARCD3-201ENST00000262188 TUBB2BQ9BVA1 445 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms