RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 VASPP50552 380 aaPredicted RBP25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 RAB6CQ53S08 254 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 ALFQ53S48 1182 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 EFHC2Q5JST6 749 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 SPDYCQ5MJ68 293 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 PMS2CLQ68D20 193 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 ZNF783Q6ZMS7 281 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 TMC6Q7Z403 805 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 TMPRSS6Q8IU80 811 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 PRCCQ92733 491 aaPredicted RBP25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 MYO19Q96H55 970 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 DNAJC7Q99615 494 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 FEM1AQ9BSK4 669 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 TRIM5Q9C035 493 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 RAB6CQ9H0N0 254 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 ARHGAP20Q9P2F6 1191 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 INVSQ9Y283 1065 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 THADAQ6YHU6 1953 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 MAP3K13O43283 966 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 ATMINO43313 823 aaPredicted RBP25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 EPN2O95208 641 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 PLEKP08567 350 aaPredicted RBP25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 PSMA2P25787 234 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 OR1E1P30953 314 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 COPAP53621 1224 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 KRT83P78385 493 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 SCYL2Q6P3W7 929 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 KIAA1324Q6UXG2 1013 aaKnown RBP25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 CCDC185Q8N715 623 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 RLN3Q8WXF3 142 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 ALG14Q96F25 216 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 SIPA1Q96FS4 1042 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 MKRN2Q9H000 416 aaKnown RBP25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 MUC3BQ9H195 1237 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 MPP6Q9NZW5 540 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 SLC25A13Q9UJS0 675 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 VPS28Q9UK41 221 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 RALGAPA1Q6GYQ0 2036 aa25.02■■□□□ 1.6
SDF2L1-201ENST00000248958 A0A087X0T9 212 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 TARSL2A2RTX5 802 aaKnown RBP25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 RNF8O76064 485 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 FAM228BP0C875 321 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 ACADMP11310 421 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 OGDHQ02218 1023 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 ACAP1Q15027 740 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 HNRNPA1L2Q32P51 320 aaKnown RBP25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 MANEALQ5VSG8 457 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 ALKBH5Q6P6C2 394 aaKnown RBP25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 LPCAT2Q7L5N7 544 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 DNAAF5Q86Y56 855 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 DCLK2Q8N568 766 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 PRSS16Q9NQE7 514 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 OR51B4Q9Y5P0 310 aa25.01■■□□□ 1.59
SDF2L1-201ENST00000248958 SSU72P8A0A1W2PR75 194 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 ILVBLA1L0T0 632 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 FOXD2O60548 495 aaPredicted RBP25■■□□□ 1.59
SDF2L1-201ENST00000248958 L1CAMP32004 1257 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 CTSOP43234 321 aaPredicted RBP25■■□□□ 1.59
SDF2L1-201ENST00000248958 ZBTB16Q05516 673 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 MAPK8IP2Q13387 824 aaPredicted RBP25■■□□□ 1.59
SDF2L1-201ENST00000248958 CCDC122Q5T0U0 273 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 CNGA4Q8IV77 575 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 OR52K2Q8NGK3 314 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 TBC1D31Q96DN5 1066 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 ERLEC1Q96DZ1 483 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 C2orf49Q9BVC5 232 aaPredicted RBP25■■□□□ 1.59
SDF2L1-201ENST00000248958 ITM2CQ9NQX7 267 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 ABHD10Q9NUJ1 306 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 USP36Q9P275 1121 aaKnown RBP25■■□□□ 1.59
SDF2L1-201ENST00000248958 MYO1AQ9UBC5 1043 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 FZD10Q9ULW2 581 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 ZFHX2Q9C0A1 2572 aaPredicted RBP25■■□□□ 1.59
SDF2L1-201ENST00000248958 CEP192Q8TEP8 1941 aa25■■□□□ 1.59
SDF2L1-201ENST00000248958 IGHV1OR15-9A0A0B4J2B8 117 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 EDDM13A0A1B0GTR0 161 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 EIF3CLB5ME19 914 aaKnown RBP24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 AP5Z1O43299 807 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 MFAP3LO75121 409 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 DMDP11532 3685 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 RHOQP17081 205 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 BCKDHBP21953 392 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 OXTRP30559 389 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 MAPKAPK2P49137 400 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 ARTNQ5T4W7 220 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 TFAP2DQ7Z6R9 452 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 ZNF366Q8N895 744 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 EIF3CQ99613 913 aaKnown RBP24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 SLC6A17Q9H1V8 727 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 DEF6Q9H4E7 631 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 MBD1Q9UIS9 605 aaPredicted RBP24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 VPS13AQ96RL7 3174 aa24.99■■□□□ 1.59
SDF2L1-201ENST00000248958 FAM186AA6NE01 2351 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 OTOGLQ3ZCN5 2332 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 RNASEH1O60930 286 aaKnown RBP24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 LRIG2O94898 1065 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 HTR7P34969 479 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 ETFBP38117 255 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 EIF4A3P38919 411 aaKnown RBP24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 DPP6P42658 865 aa24.98■■□□□ 1.59
SDF2L1-201ENST00000248958 SLC18A3Q16572 532 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms