RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RETREG1Q9H6L5 497 aa27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 MUTYHQ9UIF7 546 aa27.97■■■□□ 2.07
CHMP4B-201ENST00000217402 SPECC1L-ADORA2AF8WAN1 911 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 ZNF185O15231 689 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 MAP3K6O95382 1288 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 HLA-FP30511 346 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 DGKGP49619 791 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 CCDC181Q5TID7 509 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 RNF219Q5W0B1 726 aaPredicted RBP27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 C1orf228Q6PIY5 440 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 CCDC33Q8N5R6 958 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 HAUS1Q96CS2 278 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 SLC2A11Q9BYW1 496 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 KLC2Q9H0B6 622 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 DONSONQ9NYP3 566 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 DEC1Q9P2X7 70 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 SAR1BQ9Y6B6 198 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 RAMP2O60895 175 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 TCP1P17987 556 aaKnown RBP27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 CTHP32929 405 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 SERPINB6P35237 376 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 CSKP41240 450 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 GBE1Q04446 702 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 MESP2Q0VG99 397 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 GRAMD4Q6IC98 578 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 NPNTQ6UXI9 565 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 BBS12Q6ZW61 710 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 TP53INP2Q8IXH6 220 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 UMODL1-AS1Q8N2C9 162 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 MS4A14Q96JA4 679 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 MUC3BQ9H195 1237 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 NOL6Q9H6R4 1146 aaKnown RBP27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 FBXO10Q9UK96 956 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 EFR3BQ9Y2G0 817 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 HEY1Q9Y5J3 304 aa27.96■■■□□ 2.07
CHMP4B-201ENST00000217402 A0A0D9SEW6 157 aa27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 TCRBV7S2A1N4TA0A589 114 aa27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 TJP3O95049 919 aa27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 ZFXP17010 805 aaPredicted RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 MZF1P28698 734 aaPredicted RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 AMPD2Q01433 879 aa27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 GNA12Q03113 381 aa27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 PAFAH1B3Q15102 231 aaKnown RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 ADAT2Q7Z6V5 191 aaKnown RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 SLC13A5Q86YT5 568 aaPredicted RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 ZNF557Q8N988 423 aaPredicted RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 KIAA1522Q9P206 1035 aaPredicted RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 SAE1Q9UBE0 346 aaPredicted RBP27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 GGA2Q9UJY4 613 aa27.95■■■□□ 2.06
CHMP4B-201ENST00000217402 FGGP02679 453 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 TUBB4AP04350 444 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 CISD3P0C7P0 127 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 POLD3Q15054 466 aaPredicted RBP27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 SLC44A4Q53GD3 710 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 TXNDC11Q6PKC3 985 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 OR7D4Q8NG98 312 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 C8orf33Q9H7E9 229 aaPredicted RBP27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 SMARCAL1Q9NZC9 954 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 CA14Q9ULX7 337 aa27.94■■■□□ 2.06
CHMP4B-201ENST00000217402 ILVBLA1L0T0 632 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 DFFAO00273 331 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 ZNF500O60304 480 aaPredicted RBP27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 PABPC1P11940 636 aaKnown RBP27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 PECAM1P16284 738 aaPredicted RBP27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 RALGPS2Q86X27 583 aaPredicted RBP27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 ZNF354CQ86Y25 554 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 ARHGAP12Q8IWW6 846 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 LZTR1Q8N653 840 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 HMCESQ96FZ2 354 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 LMLNQ96KR4 655 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 CAPZA3Q96KX2 299 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 SLC39A8Q9C0K1 460 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 LRRC19Q9H756 370 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 PRDM16Q9HAZ2 1276 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 VPS28Q9UK41 221 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 VCANP13611 3396 aa27.93■■■□□ 2.06
CHMP4B-201ENST00000217402 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 RASA4BC9J798 803 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 RASA4O43374 803 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 PRLRP16471 622 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 ACVRL1P37023 503 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 EIF2DP41214 584 aaKnown RBP27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 NDST2P52849 883 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 GEN1Q17RS7 908 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 FUT11Q495W5 492 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 TPRG1Q6ZUI0 275 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 APCDD1Q8J025 514 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 PNKPQ96T60 521 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 UHRF1Q96T88 793 aaPredicted RBP27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 P2RY13Q9BPV8 354 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 FEM1AQ9BSK4 669 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 SPON2Q9BUD6 331 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 DTLQ9NZJ0 730 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 FBXL21Q9UKT6 434 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 TGM2P21980 687 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 OXCT1P55809 520 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 SLC10A2Q12908 348 aaPredicted RBP27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 KLF1Q13351 362 aaPredicted RBP27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 LONRF2Q1L5Z9 754 aa27.92■■■□□ 2.06
CHMP4B-201ENST00000217402 AFMIDQ63HM1 303 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms